Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC093388.1-201ENST00000609166 430 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 MIR6793-201ENST00000612376 63 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC109309.2-201ENST00000612597 332 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AL392048.1-201ENST00000613946 534 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AL359513.1-201ENST00000614364 557 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 OR8G3P-202ENST00000641572 1255 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 LINC02211-204ENST00000642024 1070 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 NLRP3P1-201ENST00000622303 1785 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AL356317.1-201ENST00000396110 1436 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC021755.1-201ENST00000559747 1447 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC025470.1-201ENST00000510053 2032 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 AC092451.3-201ENST00000625067 1343 ntBASIC5.72□□□□□ -1.49
RNF31Q96EP0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF31Q96EP0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.71□□□□□ -1.49
RNF31Q96EP0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.71□□□□□ -1.49
RNF31Q96EP0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
RNF31Q96EP0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF31Q96EP0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF31Q96EP0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF31Q96EP0 MIR323A-201ENST00000362199 86 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 RNU1-150P-201ENST00000362491 162 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 GNG5P2-201ENST00000372054 207 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 Y_RNA.472-201ENST00000384322 102 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 HMGB1P10-201ENST00000395823 563 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 RNA5SP178-201ENST00000410380 128 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 RN7SKP182-201ENST00000410772 298 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 RPL35AP3-201ENST00000414680 288 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 EIF4A1P1-201ENST00000420241 934 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AL589880.1-201ENST00000448271 287 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF31Q96EP0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 MTND2P14-201ENST00000482139 351 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 RN7SL214P-201ENST00000487317 265 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 OR2A20P-203ENST00000498397 1268 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC008629.2-201ENST00000503783 483 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC021146.7-201ENST00000509604 775 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF31Q96EP0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC027026.1-201ENST00000532323 742 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC090236.2-201ENST00000587933 1101 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AL158042.1-201ENST00000605338 460 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC007349.4-201ENST00000608114 532 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 AL049767.1-202ENST00000637826 242 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AL121839.2-201ENST00000565058 6943 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF31Q96EP0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF31Q96EP0 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF31Q96EP0 AC132825.1-201ENST00000463573 2247 ntBASIC5.71□□□□□ -1.5
RNF31Q96EP0 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF31Q96EP0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF31Q96EP0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF31Q96EP0 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF31Q96EP0 AC079298.1-201ENST00000625026 1619 ntBASIC5.7□□□□□ -1.5
RNF31Q96EP0 SAMM50P1-201ENST00000455403 1399 ntBASIC5.7□□□□□ -1.5
RNF31Q96EP0 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF31Q96EP0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF31Q96EP0 AC011503.2-201ENST00000594230 1500 ntBASIC5.7□□□□□ -1.5
RNF31Q96EP0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms