Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-252P-201ENST00000363232 107 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 RPL5P2-201ENST00000429598 854 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 LRRC37A14P-201ENST00000452297 462 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 RN7SL188P-201ENST00000469842 285 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 UBA52P7-201ENST00000486088 380 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 ASNSP4-201ENST00000511103 447 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 RN7SKP141-201ENST00000516167 338 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 MIR4760-201ENST00000585040 80 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 AC025175.1-201ENST00000606482 759 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 AC021851.1-201ENST00000608537 1082 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 AC090912.3-201ENST00000609775 533 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 AC093875.1-201ENST00000623688 504 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 AC010608.3-201ENST00000625048 527 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 AC099654.8-201ENST00000637757 681 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 OR13C1P-202ENST00000641378 2919 ntBASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CHMP4CQ96CF2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AL121886.1-201ENST00000358609 435 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 RNA5SP46-201ENST00000362370 120 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 RN7SKP185-201ENST00000362813 326 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 MIR122-201ENST00000385044 85 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 MIR130A-201ENST00000385274 89 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 MT-TP-201ENST00000387461 68 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 RNU6-796P-201ENST00000391086 107 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AL590806.1-201ENST00000415818 853 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AL022331.1-201ENST00000429025 477 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 MTCO1P43-201ENST00000431831 488 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC099670.2-201ENST00000435130 321 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC006994.1-201ENST00000438212 839 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC005297.1-201ENST00000444765 862 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 RPS26P39-201ENST00000469206 341 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 CYCSP20-201ENST00000473154 315 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 SCARNA21.2-201ENST00000516600 166 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 IGHV3-63-201ENST00000518422 341 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AL049872.1-201ENST00000556323 322 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC104229.1-201ENST00000561364 255 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC106730.2-201ENST00000566641 540 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC124283.4-201ENST00000581815 456 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AL589674.2-201ENST00000604304 337 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC034236.3-201ENST00000605999 461 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC027449.1-201ENST00000608890 407 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC007275.1-201ENST00000621243 671 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AL360270.2-201ENST00000562952 5985 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 LINC01963-201ENST00000562038 3148 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 AC008432.1-201ENST00000615912 1320 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 CDC27P2-201ENST00000425026 1922 ntBASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
CHMP4CQ96CF2 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHMP4CQ96CF2 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHMP4CQ96CF2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
CHMP4CQ96CF2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CHMP4CQ96CF2 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms