Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFT1Q96AA3 AC011447.7-201ENST00000624228 1590 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFT1Q96AA3 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFT1Q96AA3 RN7SKP28-201ENST00000364770 305 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 UBE2V1P15-201ENST00000407776 448 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 AC007738.1-201ENST00000413892 348 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFT1Q96AA3 AC066692.1-201ENST00000421721 457 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 MTND4P24-201ENST00000424002 397 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 AC127526.2-201ENST00000426436 775 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 ZNF965P-201ENST00000432501 817 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFT1Q96AA3 AL691517.1-201ENST00000440833 1235 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 AL596266.1-201ENST00000448132 400 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 RPS12P31-201ENST00000491419 398 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 HAUS1P1-201ENST00000505275 832 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 COL6A4P2-205ENST00000509855 506 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 HMGB1P42-201ENST00000532126 553 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 AC107918.3-201ENST00000533272 382 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 BNIP3P1-201ENST00000547295 580 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 LINC00557-201ENST00000563184 1279 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 AP005403.1-201ENST00000579720 229 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFT1Q96AA3 AC005520.3-201ENST00000602874 370 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 AL359091.2-201ENST00000609303 556 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 AC025016.1-201ENST00000616746 682 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.75□□□□□ -1.65
RFT1Q96AA3 AL022393.1-201ENST00000625142 1677 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFT1Q96AA3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFT1Q96AA3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFT1Q96AA3 AL672167.1-204ENST00000641875 3017 ntBASIC4.75□□□□□ -1.65
RFT1Q96AA3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 SRRM1P3-201ENST00000426911 2678 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RFT1Q96AA3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 OR55B1P-203ENST00000641518 2602 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 SNORD115-48-201ENST00000364764 76 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 AL078599.1-201ENST00000402075 293 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 AL034374.1-201ENST00000406329 351 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AC245060.4-201ENST00000413293 1121 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AL035660.1-201ENST00000422041 222 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 OR6K4P-201ENST00000423179 955 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AC115283.1-201ENST00000427353 400 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AL022331.1-201ENST00000429025 477 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 NDUFA5P10-201ENST00000432147 357 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 MTND2P21-201ENST00000436242 1042 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 MTND2P25-201ENST00000449028 610 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AL358876.1-201ENST00000453364 1075 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AP000547.1-201ENST00000454360 617 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 RPS17P15-201ENST00000475609 349 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AC087672.1-201ENST00000479876 766 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 RPL9P15-201ENST00000491096 532 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 SETP12-201ENST00000514068 805 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.74□□□□□ -1.65
RFT1Q96AA3 SNORA70.20-201ENST00000516848 126 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 SCARNA20.4-201ENST00000516969 131 ntBASIC4.74□□□□□ -1.65
RFT1Q96AA3 HMGB1P19-201ENST00000517578 577 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms