Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 PNRC2P1-201ENST00000423940 420 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AL445669.2-201ENST00000454425 421 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC104339.1-201ENST00000465478 348 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC021006.1-201ENST00000489849 553 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 DUTP1-201ENST00000493631 470 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.5□□□□□ -1.37
ERCC4Q92889 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 SUMO2P4-201ENST00000504193 276 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.5□□□□□ -1.37
ERCC4Q92889 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC021146.7-201ENST00000509604 775 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.5□□□□□ -1.37
ERCC4Q92889 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 RNU6-1028P-201ENST00000517164 93 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.5□□□□□ -1.37
ERCC4Q92889 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 MTND4P33-201ENST00000556706 766 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 AC091078.2-201ENST00000557145 559 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC124916.2-201ENST00000604416 224 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC4Q92889 Z82195.1-201ENST00000604558 398 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 HIRAP1-201ENST00000605318 787 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 AC009090.3-201ENST00000616553 565 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 FAM27E2-201ENST00000619668 403 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC073593.1-201ENST00000624500 411 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AP001052.1-201ENST00000626421 99 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC090897.3-201ENST00000636973 1157 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ERCC4Q92889 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ERCC4Q92889 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
ERCC4Q92889 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 AC120338.1-201ENST00000625074 1541 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC4Q92889 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.5□□□□□ -1.37
ERCC4Q92889 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC4Q92889 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC4Q92889 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
ERCC4Q92889 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC4Q92889 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC4Q92889 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
ERCC4Q92889 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.49□□□□□ -1.37
ERCC4Q92889 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.49□□□□□ -1.37
ERCC4Q92889 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.49□□□□□ -1.37
ERCC4Q92889 HSPA8P14-201ENST00000552265 1805 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.49□□□□□ -1.37
ERCC4Q92889 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ERCC4Q92889 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ERCC4Q92889 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.49□□□□□ -1.37
ERCC4Q92889 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ERCC4Q92889 MIR621-201ENST00000384919 96 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 RNU4-22P-201ENST00000411058 166 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 AC096921.1-201ENST00000411661 375 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 BTF3P9-201ENST00000418784 283 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.49□□□□□ -1.37
ERCC4Q92889 RPS27AP6-201ENST00000427962 448 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 UBE2V1P1-201ENST00000430836 445 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 FTLP19-201ENST00000433300 394 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 AC084290.1-201ENST00000434995 374 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.49□□□□□ -1.37
ERCC4Q92889 KATNBL1P3-201ENST00000443475 909 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 HMGB1P7-201ENST00000450921 612 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 TPTE2P5-203ENST00000458118 728 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.49□□□□□ -1.37
ERCC4Q92889 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC4Q92889 AC105384.2-201ENST00000508433 640 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC4Q92889 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.49□□□□□ -1.37
ERCC4Q92889 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.49□□□□□ -1.37
ERCC4Q92889 OR8I1P-201ENST00000529291 931 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.49□□□□□ -1.37
ERCC4Q92889 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.49□□□□□ -1.37
ERCC4Q92889 AL121594.2-201ENST00000541658 472 ntBASIC6.49□□□□□ -1.37
ERCC4Q92889 ZNF321P-202ENST00000550843 495 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms