Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SLC25A51P1-201ENST00000468432 871 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 RPL21P18-201ENST00000469899 480 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 RPS17P11-201ENST00000474297 293 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 RPL7AP6-201ENST00000477943 801 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 RN7SL423P-201ENST00000486202 304 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AC108729.1-201ENST00000487812 947 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 RN7SL447P-201ENST00000494711 245 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 TRAV31-201ENST00000502780 342 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 RN7SKP141-201ENST00000516167 338 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 BLZF2P-201ENST00000553776 1130 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 MIR4311-201ENST00000580794 100 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 MIR4433B-201ENST00000581329 102 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AC245100.7-201ENST00000609678 442 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AC116651.1-201ENST00000609724 556 ntBASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.61□□□□□ -1.51
HMGB4Q8WW32 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AL359955.1-201ENST00000455242 3275 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 UGT2B26P-201ENST00000508672 1613 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC022164.1-201ENST00000568767 2673 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 U8.4-201ENST00000363626 134 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 RN7SKP125-201ENST00000410481 302 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 VN1R51P-201ENST00000411675 945 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC010385.1-201ENST00000412374 256 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 CYCSP42-201ENST00000450823 238 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 HSPE1P22-201ENST00000456856 327 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC104982.1-201ENST00000478775 574 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 TRBV5-2-201ENST00000489095 273 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC069306.1-201ENST00000507006 843 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC013701.1-201ENST00000522657 465 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 EIF4A2P5-201ENST00000529914 499 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AL121594.2-201ENST00000541658 472 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AL049870.4-201ENST00000555741 486 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC023825.1-201ENST00000566704 1030 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 MTND1P8-201ENST00000571424 950 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC124016.2-201ENST00000610058 665 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 Mico1.1-201ENST00000611698 204 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 VN1R9P-201ENST00000614184 867 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC068870.2-201ENST00000620635 389 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 AC013437.2-201ENST00000639587 677 ntBASIC5.6□□□□□ -1.51
HMGB4Q8WW32 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGB4Q8WW32 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 LINC01963-201ENST00000562038 3148 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 AC005224.3-201ENST00000584683 2140 ntBASIC5.59□□□□□ -1.51
HMGB4Q8WW32 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HMGB4Q8WW32 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms