Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 AL049839.1-201ENST00000556151 657 ntBASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHROOM3Q8TF72 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 AC063976.2-201ENST00000425667 3556 ntBASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 RNA5SP428-201ENST00000365129 132 ntBASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 AL136231.1-201ENST00000429407 730 ntBASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 IGBP1P5-201ENST00000507524 1000 ntBASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 RNA5SP392-201ENST00000516905 112 ntBASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHROOM3Q8TF72 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 Y_RNA.126-201ENST00000363382 111 ntBASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 AC019050.1-201ENST00000418508 492 ntBASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 AC091180.1-201ENST00000462104 372 ntBASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 AC025164.1-201ENST00000496249 478 ntBASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 OR7E128P-201ENST00000532736 1024 ntBASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 AL110118.1-201ENST00000553543 400 ntBASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 AC098935.2-201ENST00000604222 466 ntBASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 AC108359.1-201ENST00000616451 1211 ntBASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 ECM1P2-201ENST00000503354 1577 ntBASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.14□□□□□ -1.59
SHROOM3Q8TF72 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 GLULP6-201ENST00000399502 913 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 AC007738.1-201ENST00000413892 348 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 PCNPP4-201ENST00000414817 517 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 VTI1BP4-201ENST00000427516 527 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 AC073264.2-201ENST00000448886 166 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 OR11I1P-201ENST00000486033 954 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 NMNAT1P1-201ENST00000554095 876 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 AC073575.2-201ENST00000614212 627 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 AL356752.1-201ENST00000615844 593 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 BX284613.1-201ENST00000452221 1641 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 Z95331.1-201ENST00000623075 23112 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 CNOT7P1-201ENST00000429006 852 ntBASIC5.13□□□□□ -1.59
SHROOM3Q8TF72 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms