Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CLHC1Q8NHS4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.91□□□□□ -1.62
CLHC1Q8NHS4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CLHC1Q8NHS4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLHC1Q8NHS4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CLHC1Q8NHS4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLHC1Q8NHS4 AC025574.1-201ENST00000554784 1653 ntBASIC4.9□□□□□ -1.62
CLHC1Q8NHS4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CLHC1Q8NHS4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 RNA5SP242-201ENST00000364171 118 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 SNORA11.3-201ENST00000408471 128 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 RNA5SP178-201ENST00000410380 128 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 RN7SKP59-201ENST00000410520 314 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC104333.2-201ENST00000422630 192 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC009238.2-201ENST00000431026 355 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AL138787.1-202ENST00000437804 898 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 NPM1P33-201ENST00000438918 872 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC007386.1-201ENST00000455212 582 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AL133244.1-201ENST00000456007 258 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 RPS27AP2-201ENST00000457576 465 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 RPSAP39-201ENST00000467439 883 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 RN7SL717P-201ENST00000478343 297 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 SIAH1P1-201ENST00000479411 923 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 TRBV8-1-201ENST00000481590 279 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC005412.2-201ENST00000492004 341 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 RNA5SP362-201ENST00000516048 118 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC090888.3-201ENST00000558917 509 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC069307.1-201ENST00000602820 447 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AL589674.2-201ENST00000604304 337 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC037198.3-201ENST00000616754 526 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 SNORA11.6-201ENST00000619030 128 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC073869.10-201ENST00000642016 354 ntBASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.9□□□□□ -1.63
CLHC1Q8NHS4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 VPS35P1-201ENST00000563400 1518 ntBASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 RNU6-178P-201ENST00000384631 104 ntBASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AC009804.1-201ENST00000400949 179 ntBASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AC013429.2-201ENST00000418798 781 ntBASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 RPL10P17-201ENST00000453852 316 ntBASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 RPS6P2-201ENST00000454208 705 ntBASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 TPT1P1-201ENST00000458495 518 ntBASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 RPL7P6-201ENST00000480903 738 ntBASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AC233702.9-201ENST00000581528 203 ntBASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AP005131.7-201ENST00000610087 611 ntBASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AL357153.4-201ENST00000620487 1016 ntBASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 AP000648.2-201ENST00000624182 404 ntBASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 ZNF652P1-201ENST00000442420 1309 ntBASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CLHC1Q8NHS4 LINC01355-201ENST00000566551 5444 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms