Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MIR6075-201ENST00000620782 95 ntBASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC168Q8NDH2 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 RNU1-94P-201ENST00000362627 173 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 RPL21P108-201ENST00000413857 481 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 RCC2P2-201ENST00000422174 918 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 MSL3P1-202ENST00000440028 1468 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 AC011742.2-201ENST00000443818 352 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 ENPP7P9-201ENST00000514456 627 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 AC090220.1-201ENST00000593078 1699 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 AL355834.1-201ENST00000556602 3965 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 SNORD8-201ENST00000363915 110 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 AL121977.1-201ENST00000401636 979 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 AC091390.3-201ENST00000426478 338 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 OR7E125P-201ENST00000443450 846 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 SLC25A18P1-201ENST00000449385 454 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 TCEA1P1-201ENST00000449716 880 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 AC108751.3-201ENST00000461814 1020 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 AC017100.2-201ENST00000584628 355 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 AL133481.2-203ENST00000607558 139 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 AC018816.2-201ENST00000621460 353 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 AL391262.1-201ENST00000556558 1992 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 SMG1P4-204ENST00000523028 4131 ntBASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC168Q8NDH2 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 AL358176.3-201ENST00000420757 454 ntBASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 RPS17P5-201ENST00000498293 408 ntBASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 snoU109.5-201ENST00000516231 132 ntBASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 OR11H3P-201ENST00000554547 982 ntBASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 KPNA2P3-201ENST00000584190 848 ntBASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 AL035461.2-201ENST00000619201 524 ntBASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 AC135068.5-201ENST00000624197 983 ntBASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 AC009962.1-201ENST00000567327 3813 ntBASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 RNA5SP90-201ENST00000364801 99 ntBASIC4.19□□□□□ -1.74
CCDC168Q8NDH2 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms