Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 AC009127.1-201ENST00000467090 155 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 RPL7AP10-201ENST00000481016 791 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 RPS4XP1-201ENST00000482189 787 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 AC005412.2-201ENST00000492004 341 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 RNA5SP360-201ENST00000516555 118 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 OR4A46P-201ENST00000527255 933 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 MIR3176-201ENST00000582210 90 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 AL133406.3-201ENST00000606817 541 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 AP000864.1-201ENST00000609424 650 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 RPSAP73-201ENST00000614820 330 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 BX005214.3-202ENST00000619809 325 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 AC027228.2-201ENST00000567141 2154 ntBASIC4.03□□□□□ -1.76
TTC9CQ8N5M4 CASC19-204ENST00000641001 2055 ntBASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 DUTP5-201ENST00000406790 469 ntBASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 SNORA11.3-201ENST00000408471 128 ntBASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 GTF3AP5-201ENST00000442645 697 ntBASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 AC004825.1-201ENST00000555068 586 ntBASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 AP005432.2-201ENST00000608162 586 ntBASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 AC126915.2-201ENST00000610957 190 ntBASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 SNORA11.6-201ENST00000619030 128 ntBASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 AP001005.3-201ENST00000622049 129 ntBASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 AC099494.2-201ENST00000623371 978 ntBASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.02□□□□□ -1.77
TTC9CQ8N5M4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 OR14L1P-202ENST00000641545 3009 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 U3.2-201ENST00000362981 210 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 MIR223-201ENST00000385204 110 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 U3.32-201ENST00000408116 212 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AP000534.2-201ENST00000412729 568 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 KNOP1P3-201ENST00000446933 426 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AL389915.2-201ENST00000454576 441 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 RN7SL172P-201ENST00000460535 303 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 COPS8P2-201ENST00000473228 627 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 RN7SL30P-201ENST00000488416 306 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AC073073.1-201ENST00000493920 463 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AC113430.1-201ENST00000506872 718 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AC105031.1-201ENST00000518550 476 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AL512310.9-201ENST00000553311 948 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AL358913.1-201ENST00000554342 121 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AC124856.1-201ENST00000600819 896 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.01□□□□□ -1.77
TTC9CQ8N5M4 AC015660.5-201ENST00000623238 564 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms