Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 SETP1-201ENST00000556014 845 ntBASIC5.83□□□□□ -1.48
CCDC38Q502W7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC38Q502W7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC38Q502W7 AGGF1P9-201ENST00000561884 913 ntBASIC5.83□□□□□ -1.48
CCDC38Q502W7 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 AC126365.2-201ENST00000580630 379 ntBASIC5.83□□□□□ -1.48
CCDC38Q502W7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 BNIP3P35-201ENST00000604530 490 ntBASIC5.83□□□□□ -1.48
CCDC38Q502W7 AP000864.1-201ENST00000609424 650 ntBASIC5.83□□□□□ -1.48
CCDC38Q502W7 AL391834.2-201ENST00000609982 546 ntBASIC5.83□□□□□ -1.48
CCDC38Q502W7 VN1R9P-201ENST00000614184 867 ntBASIC5.83□□□□□ -1.48
CCDC38Q502W7 AC078880.5-201ENST00000617845 421 ntBASIC5.83□□□□□ -1.48
CCDC38Q502W7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC38Q502W7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC38Q502W7 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC38Q502W7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC38Q502W7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC38Q502W7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC38Q502W7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 CASC19-248ENST00000641674 1356 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC38Q502W7 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC38Q502W7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC38Q502W7 AC068870.1-201ENST00000563737 2455 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC38Q502W7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC38Q502W7 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC38Q502W7 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC38Q502W7 RNA5SP477-201ENST00000362639 119 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 RNA5SP500-201ENST00000364486 119 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 RN7SKP28-201ENST00000364770 305 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC38Q502W7 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC38Q502W7 AP002784.2-201ENST00000397300 549 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 AC096921.1-201ENST00000411661 375 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 AL024507.1-201ENST00000412741 274 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 AL357752.1-201ENST00000412817 349 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC38Q502W7 AL445183.3-201ENST00000414168 502 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 AC013262.1-201ENST00000426710 252 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 AC126120.1-201ENST00000431082 470 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 NDUFS5P5-201ENST00000437256 321 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 VN1R110P-201ENST00000438988 971 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 AL645931.1-201ENST00000439737 410 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 EIF5AP4-201ENST00000441206 465 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 TPT1P3-201ENST00000492841 512 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 AC114781.3-201ENST00000512083 142 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 SCARNA18.1-201ENST00000516330 83 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 TOMM20P1-201ENST00000534518 427 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 AC125612.1-201ENST00000547580 377 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 MIR3936-201ENST00000584304 110 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 AF129408.1-201ENST00000608767 431 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 AP000240.1-201ENST00000609910 452 ntBASIC5.82□□□□□ -1.48
CCDC38Q502W7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC38Q502W7 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCDC38Q502W7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.82□□□□□ -1.48
CCDC38Q502W7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC011755.1-201ENST00000623763 2049 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCDC38Q502W7 RNA5SP326-201ENST00000363209 110 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 MIR130A-201ENST00000385274 89 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC004386.1-201ENST00000393214 761 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 HMGB3P19-201ENST00000403971 560 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 MTND2P15-201ENST00000418575 892 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 OR6C64P-201ENST00000419708 825 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC009784.1-201ENST00000426484 460 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC069154.1-201ENST00000432914 542 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 PCBP2P1-201ENST00000437262 977 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 AL359265.1-201ENST00000440296 795 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.81□□□□□ -1.48
CCDC38Q502W7 LINC02210-201ENST00000444561 288 ntBASIC5.81□□□□□ -1.48
CCDC38Q502W7 AC022431.1-201ENST00000450941 438 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms