Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 SNORA2.3-201ENST00000383920 135 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 MIR137-201ENST00000385223 102 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 AC013442.1-201ENST00000397347 228 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 RN7SKP17-201ENST00000411242 351 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 ARAFP2-201ENST00000440565 559 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 MORF4L1P4-201ENST00000450245 976 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 AC006463.2-201ENST00000473326 348 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 RN7SL205P-201ENST00000490174 284 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 AC012339.2-201ENST00000523996 453 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 AP000859.1-201ENST00000525536 307 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 UBE2FP2-201ENST00000566646 462 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 RN7SL52P-201ENST00000584271 284 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 AL451049.1-201ENST00000608672 497 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 AL161616.1-201ENST00000611867 286 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 RN7SL722P-201ENST00000617780 284 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 RN7SL565P-201ENST00000618246 284 ntBASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.92□□□□□ -1.46
SHROOM1Q2M3G4 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 RNU6-249P-201ENST00000363016 102 ntBASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AC002524.1-201ENST00000411687 547 ntBASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AL590139.1-201ENST00000416267 400 ntBASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AL161722.2-201ENST00000434731 981 ntBASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AC010733.1-201ENST00000451515 401 ntBASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AC239798.3-201ENST00000454459 408 ntBASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 RN7SL443P-201ENST00000464331 290 ntBASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AC096741.1-201ENST00000472250 846 ntBASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 OR5AN2P-201ENST00000534535 896 ntBASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 BGLT3-201ENST00000564523 994 ntBASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AC002069.2-201ENST00000603580 883 ntBASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AC005377.1-201ENST00000605126 456 ntBASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 AC123912.3-201ENST00000600907 1367 ntBASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.91□□□□□ -1.46
SHROOM1Q2M3G4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 SNORA70.10-201ENST00000384515 134 ntBASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 HSPD1P12-201ENST00000429127 1069 ntBASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 RPL19P16-201ENST00000433839 588 ntBASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 NPM1P48-201ENST00000436002 853 ntBASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 SNRPFP2-201ENST00000440710 251 ntBASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 AC093890.1-201ENST00000502554 540 ntBASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 OR51K1P-201ENST00000510214 950 ntBASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 KCTD9P6-201ENST00000522306 950 ntBASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 EIF4EP5-201ENST00000528228 640 ntBASIC5.9□□□□□ -1.46
SHROOM1Q2M3G4 NMNAT1P1-201ENST00000554095 876 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms