Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBA52P62987 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBA52P62987 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBA52P62987 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBA52P62987 RNU6-249P-201ENST00000363016 102 ntBASIC4.45□□□□□ -1.7
UBA52P62987 RN7SKP6-201ENST00000364795 319 ntBASIC4.45□□□□□ -1.7
UBA52P62987 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.45□□□□□ -1.7
UBA52P62987 AL139128.1-201ENST00000413921 941 ntBASIC4.45□□□□□ -1.7
UBA52P62987 AC108075.1-201ENST00000424692 529 ntBASIC4.45□□□□□ -1.7
UBA52P62987 NIPA2P1-201ENST00000426223 976 ntBASIC4.45□□□□□ -1.7
UBA52P62987 FAM96AP1-201ENST00000430879 482 ntBASIC4.45□□□□□ -1.7
UBA52P62987 VN1R54P-201ENST00000435210 1049 ntBASIC4.45□□□□□ -1.7
UBA52P62987 MRPL35P2-201ENST00000448009 511 ntBASIC4.45□□□□□ -1.7
UBA52P62987 AL596266.1-201ENST00000448132 400 ntBASIC4.45□□□□□ -1.7
UBA52P62987 RPL7P61-201ENST00000451721 751 ntBASIC4.45□□□□□ -1.7
UBA52P62987 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.45□□□□□ -1.7
UBA52P62987 RPL35AP28-201ENST00000459730 331 ntBASIC4.45□□□□□ -1.7
UBA52P62987 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.45□□□□□ -1.7
UBA52P62987 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.45□□□□□ -1.7
UBA52P62987 AC108043.1-201ENST00000512696 574 ntBASIC4.45□□□□□ -1.7
UBA52P62987 TCP11X3P-202ENST00000514289 1254 ntBASIC4.45□□□□□ -1.7
UBA52P62987 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.45□□□□□ -1.7
UBA52P62987 AP000676.2-201ENST00000529711 301 ntBASIC4.45□□□□□ -1.7
UBA52P62987 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.45□□□□□ -1.7
UBA52P62987 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
UBA52P62987 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
UBA52P62987 BLZF2P-201ENST00000553776 1130 ntBASIC4.45□□□□□ -1.7
UBA52P62987 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
UBA52P62987 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.45□□□□□ -1.7
UBA52P62987 AC097505.1-201ENST00000610199 565 ntBASIC4.45□□□□□ -1.7
UBA52P62987 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBA52P62987 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.45□□□□□ -1.7
UBA52P62987 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.45□□□□□ -1.7
UBA52P62987 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.45□□□□□ -1.7
UBA52P62987 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.45□□□□□ -1.7
UBA52P62987 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBA52P62987 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
UBA52P62987 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBA52P62987 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
UBA52P62987 UGT2B26P-201ENST00000508672 1613 ntBASIC4.45□□□□□ -1.7
UBA52P62987 DDX18P4-201ENST00000511690 1966 ntBASIC4.45□□□□□ -1.7
UBA52P62987 SAMMSON-213ENST00000641336 1521 ntBASIC4.45□□□□□ -1.7
UBA52P62987 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBA52P62987 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBA52P62987 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
UBA52P62987 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBA52P62987 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.45□□□□□ -1.7
UBA52P62987 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
UBA52P62987 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBA52P62987 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.45□□□□□ -1.7
UBA52P62987 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBA52P62987 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBA52P62987 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.44□□□□□ -1.7
UBA52P62987 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UBA52P62987 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.44□□□□□ -1.7
UBA52P62987 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBA52P62987 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBA52P62987 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
UBA52P62987 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
UBA52P62987 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
UBA52P62987 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBA52P62987 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBA52P62987 SNORA67-201ENST00000384423 137 ntBASIC4.44□□□□□ -1.7
UBA52P62987 RNA5SP339-201ENST00000390987 122 ntBASIC4.44□□□□□ -1.7
UBA52P62987 RPSAP35-201ENST00000413753 818 ntBASIC4.44□□□□□ -1.7
UBA52P62987 AL358176.3-201ENST00000420757 454 ntBASIC4.44□□□□□ -1.7
UBA52P62987 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.44□□□□□ -1.7
UBA52P62987 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UBA52P62987 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.44□□□□□ -1.7
UBA52P62987 AC105399.1-202ENST00000447303 205 ntBASIC4.44□□□□□ -1.7
UBA52P62987 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.44□□□□□ -1.7
UBA52P62987 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.44□□□□□ -1.7
UBA52P62987 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.44□□□□□ -1.7
UBA52P62987 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.44□□□□□ -1.7
UBA52P62987 RN7SKP66-201ENST00000516681 231 ntBASIC4.44□□□□□ -1.7
UBA52P62987 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.44□□□□□ -1.7
UBA52P62987 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.44□□□□□ -1.7
UBA52P62987 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.44□□□□□ -1.7
UBA52P62987 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.44□□□□□ -1.7
UBA52P62987 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.44□□□□□ -1.7
UBA52P62987 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.44□□□□□ -1.7
UBA52P62987 MIR4311-201ENST00000580794 100 ntBASIC4.44□□□□□ -1.7
UBA52P62987 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.44□□□□□ -1.7
UBA52P62987 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.44□□□□□ -1.7
UBA52P62987 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.44□□□□□ -1.7
UBA52P62987 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.44□□□□□ -1.7
UBA52P62987 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
UBA52P62987 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
UBA52P62987 AC120338.1-201ENST00000625074 1541 ntBASIC4.44□□□□□ -1.7
UBA52P62987 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.44□□□□□ -1.7
UBA52P62987 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.44□□□□□ -1.7
UBA52P62987 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBA52P62987 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBA52P62987 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.44□□□□□ -1.7
UBA52P62987 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.44□□□□□ -1.7
UBA52P62987 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
UBA52P62987 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UBA52P62987 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBA52P62987 PWAR1-201ENST00000624188 2414 ntBASIC4.43□□□□□ -1.7
UBA52P62987 AC023421.1-201ENST00000590535 1785 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms