Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SPCS3P61009 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.25□□□□□ -1.73
SPCS3P61009 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SPCS3P61009 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.24□□□□□ -1.73
SPCS3P61009 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SPCS3P61009 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
SPCS3P61009 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
SPCS3P61009 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SPCS3P61009 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SPCS3P61009 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.24□□□□□ -1.73
SPCS3P61009 AC011155.1-201ENST00000316512 456 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 OR7E25P-201ENST00000344844 931 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 RPL34P3-201ENST00000421454 338 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 RWDD4P2-201ENST00000426392 563 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 AC110602.1-201ENST00000437414 318 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 AC105399.1-202ENST00000447303 205 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.24□□□□□ -1.73
SPCS3P61009 AC026348.1-201ENST00000462549 1053 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 AC112206.1-201ENST00000468416 477 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 RWDD4P1-201ENST00000488019 565 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 AC073358.1-201ENST00000505671 684 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.24□□□□□ -1.73
SPCS3P61009 AC021146.3-201ENST00000511911 260 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 AC018797.3-201ENST00000513388 1241 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 MYL12AP1-201ENST00000518490 515 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.24□□□□□ -1.73
SPCS3P61009 AC078878.1-201ENST00000539832 958 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 AL049872.1-201ENST00000556323 322 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.24□□□□□ -1.73
SPCS3P61009 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.24□□□□□ -1.73
SPCS3P61009 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.24□□□□□ -1.73
SPCS3P61009 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.24□□□□□ -1.73
SPCS3P61009 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.24□□□□□ -1.73
SPCS3P61009 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.24□□□□□ -1.73
SPCS3P61009 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.24□□□□□ -1.73
SPCS3P61009 AL139286.1-201ENST00000604465 483 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 AC018695.5-201ENST00000605872 315 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 AC008115.3-201ENST00000614874 549 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 AC037198.3-201ENST00000616754 526 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 MIR193BHG-214ENST00000641765 509 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SPCS3P61009 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.24□□□□□ -1.73
SPCS3P61009 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.24□□□□□ -1.73
SPCS3P61009 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SPCS3P61009 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SPCS3P61009 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.24□□□□□ -1.73
SPCS3P61009 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
SPCS3P61009 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SPCS3P61009 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SPCS3P61009 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SPCS3P61009 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SPCS3P61009 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SPCS3P61009 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SPCS3P61009 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SPCS3P61009 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
SPCS3P61009 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.23□□□□□ -1.73
SPCS3P61009 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
SPCS3P61009 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.23□□□□□ -1.73
SPCS3P61009 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.23□□□□□ -1.73
SPCS3P61009 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SPCS3P61009 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.23□□□□□ -1.73
SPCS3P61009 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
SPCS3P61009 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SPCS3P61009 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.23□□□□□ -1.73
SPCS3P61009 AL450992.3-201ENST00000413192 568 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.23□□□□□ -1.73
SPCS3P61009 AC066692.1-201ENST00000421721 457 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 NAP1L4P2-201ENST00000425958 899 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 AL662874.1-201ENST00000426065 230 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 AL158073.1-201ENST00000426848 1104 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.23□□□□□ -1.73
SPCS3P61009 HMGB3P10-201ENST00000434734 572 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 CLNS1AP1-201ENST00000435954 682 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.23□□□□□ -1.73
SPCS3P61009 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.23□□□□□ -1.73
SPCS3P61009 AC069285.2-201ENST00000440210 275 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.23□□□□□ -1.73
SPCS3P61009 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.23□□□□□ -1.73
SPCS3P61009 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.23□□□□□ -1.73
SPCS3P61009 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.23□□□□□ -1.73
SPCS3P61009 RPL7P40-201ENST00000481703 745 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 AC058823.1-201ENST00000485315 474 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 RPS6P4-201ENST00000494693 758 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 CYCSP22-201ENST00000517555 339 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 TRIM77BP-201ENST00000524985 1119 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SPCS3P61009 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.23□□□□□ -1.73
SPCS3P61009 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.23□□□□□ -1.73
SPCS3P61009 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
SPCS3P61009 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.23□□□□□ -1.73
SPCS3P61009 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SPCS3P61009 AC011840.5-201ENST00000582125 771 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.23□□□□□ -1.73
SPCS3P61009 AL159169.2-201ENST00000610061 1269 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 uc_338.18-201ENST00000615451 175 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 AC025262.3-201ENST00000623666 360 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 AC132068.1-201ENST00000623805 459 ntBASIC4.23□□□□□ -1.73
SPCS3P61009 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms