Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CLDN6P56747 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDN6P56747 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN6P56747 RN7SKP145-201ENST00000363291 303 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CLDN6P56747 AC068538.1-201ENST00000376856 336 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 NUDT19P3-201ENST00000404698 555 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.94□□□□□ -1.62
CLDN6P56747 DPPA2P2-201ENST00000418220 897 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 AC092570.3-201ENST00000420113 693 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 AC009480.2-201ENST00000422916 432 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.94□□□□□ -1.62
CLDN6P56747 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.94□□□□□ -1.62
CLDN6P56747 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.94□□□□□ -1.62
CLDN6P56747 LINC02210-201ENST00000444561 288 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.94□□□□□ -1.62
CLDN6P56747 AC104849.1-201ENST00000462623 405 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 AC093827.1-201ENST00000480094 861 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.94□□□□□ -1.62
CLDN6P56747 RNA5SP43-201ENST00000516559 110 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 AC074050.1-201ENST00000563247 211 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.94□□□□□ -1.62
CLDN6P56747 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.94□□□□□ -1.62
CLDN6P56747 MIR3667-201ENST00000581025 74 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.94□□□□□ -1.62
CLDN6P56747 AC009237.13-201ENST00000603193 276 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 LSM1P2-201ENST00000604911 322 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.94□□□□□ -1.62
CLDN6P56747 MIR6133-201ENST00000617057 108 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 AC099654.6-201ENST00000636487 512 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 AC135068.12-201ENST00000637370 931 ntBASIC4.94□□□□□ -1.62
CLDN6P56747 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CLDN6P56747 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN6P56747 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLDN6P56747 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.94□□□□□ -1.62
CLDN6P56747 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CLDN6P56747 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN6P56747 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN6P56747 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN6P56747 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLDN6P56747 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CLDN6P56747 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CLDN6P56747 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN6P56747 AC011503.2-201ENST00000594230 1500 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDN6P56747 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
CLDN6P56747 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CLDN6P56747 RNA5SP479-201ENST00000364858 117 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CLDN6P56747 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN6P56747 SNORA66-201ENST00000384792 133 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CLDN6P56747 RPS4XP9-201ENST00000405151 780 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN6P56747 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDN6P56747 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.93□□□□□ -1.62
CLDN6P56747 CNOT7P1-201ENST00000429006 852 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 RPSAP41-201ENST00000439695 860 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 AL137845.2-201ENST00000444292 988 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDN6P56747 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
CLDN6P56747 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.93□□□□□ -1.62
CLDN6P56747 AC111000.5-201ENST00000506559 1178 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN6P56747 AC021106.1-201ENST00000509020 1058 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 COX6B1P5-201ENST00000509843 249 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 KCTD9P6-201ENST00000522306 950 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CLDN6P56747 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDN6P56747 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDN6P56747 BGLT3-201ENST00000564523 994 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.93□□□□□ -1.62
CLDN6P56747 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.93□□□□□ -1.62
CLDN6P56747 AC244107.2-201ENST00000611773 76 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 SAMMSON-226ENST00000642089 1582 ntBASIC4.93□□□□□ -1.62
CLDN6P56747 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CLDN6P56747 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLDN6P56747 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDN6P56747 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
CLDN6P56747 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.93□□□□□ -1.62
CLDN6P56747 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.92□□□□□ -1.62
CLDN6P56747 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLDN6P56747 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLDN6P56747 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CLDN6P56747 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.92□□□□□ -1.62
CLDN6P56747 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.92□□□□□ -1.62
CLDN6P56747 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLDN6P56747 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.92□□□□□ -1.62
CLDN6P56747 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CLDN6P56747 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.92□□□□□ -1.62
CLDN6P56747 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLDN6P56747 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CLDN6P56747 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLDN6P56747 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CLDN6P56747 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CLDN6P56747 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms