Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
PKNOX1P55347 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.93□□□□□ -1.62
PKNOX1P55347 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.92□□□□□ -1.62
PKNOX1P55347 BTBD10P1-201ENST00000549824 1352 ntBASIC4.92□□□□□ -1.62
PKNOX1P55347 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PKNOX1P55347 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PKNOX1P55347 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PKNOX1P55347 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.92□□□□□ -1.62
PKNOX1P55347 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PKNOX1P55347 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PKNOX1P55347 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PKNOX1P55347 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.92□□□□□ -1.62
PKNOX1P55347 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PKNOX1P55347 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PKNOX1P55347 SNORA17A-201ENST00000391185 133 ntBASIC4.92□□□□□ -1.62
PKNOX1P55347 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
PKNOX1P55347 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.92□□□□□ -1.62
PKNOX1P55347 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.92□□□□□ -1.62
PKNOX1P55347 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.92□□□□□ -1.62
PKNOX1P55347 TRGV7-201ENST00000427089 353 ntBASIC4.92□□□□□ -1.62
PKNOX1P55347 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.92□□□□□ -1.62
PKNOX1P55347 RPSAP39-201ENST00000467439 883 ntBASIC4.92□□□□□ -1.62
PKNOX1P55347 RN7SL717P-201ENST00000478343 297 ntBASIC4.92□□□□□ -1.62
PKNOX1P55347 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.92□□□□□ -1.62
PKNOX1P55347 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.92□□□□□ -1.62
PKNOX1P55347 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PKNOX1P55347 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.92□□□□□ -1.62
PKNOX1P55347 MTATP6P1-201ENST00000514057 681 ntBASIC4.92□□□□□ -1.62
PKNOX1P55347 AC138938.1-201ENST00000515431 782 ntBASIC4.92□□□□□ -1.62
PKNOX1P55347 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.92□□□□□ -1.62
PKNOX1P55347 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
PKNOX1P55347 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.92□□□□□ -1.62
PKNOX1P55347 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.92□□□□□ -1.62
PKNOX1P55347 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PKNOX1P55347 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PKNOX1P55347 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.92□□□□□ -1.62
PKNOX1P55347 MIR3614-201ENST00000581261 86 ntBASIC4.92□□□□□ -1.62
PKNOX1P55347 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.92□□□□□ -1.62
PKNOX1P55347 AC109309.2-201ENST00000612597 332 ntBASIC4.92□□□□□ -1.62
PKNOX1P55347 AL356752.1-201ENST00000615844 593 ntBASIC4.92□□□□□ -1.62
PKNOX1P55347 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.92□□□□□ -1.62
PKNOX1P55347 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.92□□□□□ -1.62
PKNOX1P55347 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.92□□□□□ -1.62
PKNOX1P55347 SNORA17.5-201ENST00000630429 132 ntBASIC4.92□□□□□ -1.62
PKNOX1P55347 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.92□□□□□ -1.62
PKNOX1P55347 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.92□□□□□ -1.62
PKNOX1P55347 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PKNOX1P55347 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
PKNOX1P55347 CUL4AP1-201ENST00000514750 1863 ntBASIC4.92□□□□□ -1.62
PKNOX1P55347 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.92□□□□□ -1.62
PKNOX1P55347 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.92□□□□□ -1.62
PKNOX1P55347 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PKNOX1P55347 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 SYT14P1-202ENST00000600441 1448 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
PKNOX1P55347 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
PKNOX1P55347 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 RNA5SP132-201ENST00000364725 118 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 AL353625.1-202ENST00000366273 571 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 MIR143-201ENST00000385300 106 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 MIR1282-201ENST00000408865 101 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 RNU2-22P-201ENST00000411266 212 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.91□□□□□ -1.62
PKNOX1P55347 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.91□□□□□ -1.62
PKNOX1P55347 AC234781.4-201ENST00000419384 244 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.91□□□□□ -1.62
PKNOX1P55347 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.91□□□□□ -1.62
PKNOX1P55347 AC104843.2-201ENST00000427666 297 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.91□□□□□ -1.62
PKNOX1P55347 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.91□□□□□ -1.62
PKNOX1P55347 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.91□□□□□ -1.62
PKNOX1P55347 TXNP5-201ENST00000441043 315 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.91□□□□□ -1.62
PKNOX1P55347 SPRYD7P1-201ENST00000443861 570 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 OR52Y1P-201ENST00000452418 828 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 AC023141.9-201ENST00000458734 412 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PKNOX1P55347 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.91□□□□□ -1.62
PKNOX1P55347 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PKNOX1P55347 RNA5SP249-201ENST00000516127 99 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 AC027308.1-201ENST00000517993 110 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 AC005868.1-201ENST00000536421 331 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.91□□□□□ -1.62
PKNOX1P55347 AL049779.2-201ENST00000553847 315 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 AC020978.7-201ENST00000575953 1187 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.91□□□□□ -1.62
PKNOX1P55347 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.91□□□□□ -1.62
PKNOX1P55347 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.91□□□□□ -1.62
PKNOX1P55347 MIR6837-201ENST00000620884 64 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 AC136428.4-201ENST00000634254 1155 ntBASIC4.91□□□□□ -1.62
PKNOX1P55347 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms