Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NEK3P51956 ENSAP3-201ENST00000312710 333 ntBASIC5.95□□□□□ -1.46
NEK3P51956 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NEK3P51956 RNU1-146P-201ENST00000364015 165 ntBASIC5.95□□□□□ -1.46
NEK3P51956 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
NEK3P51956 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.95□□□□□ -1.46
NEK3P51956 RNU6-317P-201ENST00000384031 107 ntBASIC5.95□□□□□ -1.46
NEK3P51956 SNORA17A-201ENST00000391185 133 ntBASIC5.95□□□□□ -1.46
NEK3P51956 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NEK3P51956 AL035419.1-201ENST00000397037 564 ntBASIC5.95□□□□□ -1.46
NEK3P51956 OR7E101P-201ENST00000400428 513 ntBASIC5.95□□□□□ -1.46
NEK3P51956 HMGB3P18-201ENST00000406327 590 ntBASIC5.95□□□□□ -1.46
NEK3P51956 RN7SKP279-201ENST00000411383 298 ntBASIC5.95□□□□□ -1.46
NEK3P51956 RPS4XP5-201ENST00000419038 768 ntBASIC5.95□□□□□ -1.46
NEK3P51956 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.95□□□□□ -1.46
NEK3P51956 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NEK3P51956 AC242426.1-201ENST00000435270 960 ntBASIC5.95□□□□□ -1.46
NEK3P51956 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.95□□□□□ -1.46
NEK3P51956 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.95□□□□□ -1.46
NEK3P51956 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.95□□□□□ -1.46
NEK3P51956 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.95□□□□□ -1.46
NEK3P51956 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.95□□□□□ -1.46
NEK3P51956 METTL15P1-201ENST00000481421 1045 ntBASIC5.95□□□□□ -1.46
NEK3P51956 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.95□□□□□ -1.46
NEK3P51956 RN7SL423P-201ENST00000486202 304 ntBASIC5.95□□□□□ -1.46
NEK3P51956 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.95□□□□□ -1.46
NEK3P51956 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.95□□□□□ -1.46
NEK3P51956 AC069306.1-201ENST00000507006 843 ntBASIC5.95□□□□□ -1.46
NEK3P51956 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.95□□□□□ -1.46
NEK3P51956 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.95□□□□□ -1.46
NEK3P51956 SNORA70.20-201ENST00000516848 126 ntBASIC5.95□□□□□ -1.46
NEK3P51956 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NEK3P51956 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.95□□□□□ -1.46
NEK3P51956 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
NEK3P51956 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.95□□□□□ -1.46
NEK3P51956 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.95□□□□□ -1.46
NEK3P51956 MTND1P6-201ENST00000523621 946 ntBASIC5.95□□□□□ -1.46
NEK3P51956 OR8Q1P-201ENST00000526467 655 ntBASIC5.95□□□□□ -1.46
NEK3P51956 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.95□□□□□ -1.46
NEK3P51956 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEK3P51956 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.95□□□□□ -1.46
NEK3P51956 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.95□□□□□ -1.46
NEK3P51956 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.95□□□□□ -1.46
NEK3P51956 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.95□□□□□ -1.46
NEK3P51956 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.95□□□□□ -1.46
NEK3P51956 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.95□□□□□ -1.46
NEK3P51956 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.95□□□□□ -1.46
NEK3P51956 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.95□□□□□ -1.46
NEK3P51956 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.95□□□□□ -1.46
NEK3P51956 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.95□□□□□ -1.46
NEK3P51956 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.95□□□□□ -1.46
NEK3P51956 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.95□□□□□ -1.46
NEK3P51956 AC099785.1-201ENST00000605697 437 ntBASIC5.95□□□□□ -1.46
NEK3P51956 AL121890.2-201ENST00000617644 465 ntBASIC5.95□□□□□ -1.46
NEK3P51956 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.95□□□□□ -1.46
NEK3P51956 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.95□□□□□ -1.46
NEK3P51956 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.95□□□□□ -1.46
NEK3P51956 SNORA17.5-201ENST00000630429 132 ntBASIC5.95□□□□□ -1.46
NEK3P51956 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.95□□□□□ -1.46
NEK3P51956 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEK3P51956 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NEK3P51956 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEK3P51956 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEK3P51956 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEK3P51956 AC006042.3-201ENST00000454684 1469 ntBASIC5.95□□□□□ -1.46
NEK3P51956 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NEK3P51956 AC020656.2-201ENST00000613291 5309 ntBASIC5.95□□□□□ -1.46
NEK3P51956 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
NEK3P51956 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.94□□□□□ -1.46
NEK3P51956 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEK3P51956 TMSB4XP4-201ENST00000323496 618 ntBASIC5.94□□□□□ -1.46
NEK3P51956 RNA5SP500-201ENST00000364486 119 ntBASIC5.94□□□□□ -1.46
NEK3P51956 RN7SKP186-201ENST00000365371 303 ntBASIC5.94□□□□□ -1.46
NEK3P51956 RN7SKP292-201ENST00000365522 317 ntBASIC5.94□□□□□ -1.46
NEK3P51956 MIR323B-201ENST00000385269 82 ntBASIC5.94□□□□□ -1.46
NEK3P51956 U3.23-201ENST00000391132 200 ntBASIC5.94□□□□□ -1.46
NEK3P51956 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.94□□□□□ -1.46
NEK3P51956 AC096533.1-201ENST00000411645 353 ntBASIC5.94□□□□□ -1.46
NEK3P51956 AC002524.1-201ENST00000411687 547 ntBASIC5.94□□□□□ -1.46
NEK3P51956 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.94□□□□□ -1.46
NEK3P51956 NPM1P22-201ENST00000427761 952 ntBASIC5.94□□□□□ -1.46
NEK3P51956 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.94□□□□□ -1.46
NEK3P51956 CBX1P4-201ENST00000439415 457 ntBASIC5.94□□□□□ -1.46
NEK3P51956 AC092170.1-201ENST00000440211 356 ntBASIC5.94□□□□□ -1.46
NEK3P51956 SEPT14P24-201ENST00000447236 180 ntBASIC5.94□□□□□ -1.46
NEK3P51956 AC002553.2-201ENST00000453217 340 ntBASIC5.94□□□□□ -1.46
NEK3P51956 AL603882.1-201ENST00000463059 681 ntBASIC5.94□□□□□ -1.46
NEK3P51956 UBFD1P1-201ENST00000473259 814 ntBASIC5.94□□□□□ -1.46
NEK3P51956 AC099521.1-201ENST00000482557 334 ntBASIC5.94□□□□□ -1.46
NEK3P51956 RPL38P3-201ENST00000484463 213 ntBASIC5.94□□□□□ -1.46
NEK3P51956 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.94□□□□□ -1.46
NEK3P51956 TPT1P8-201ENST00000510120 555 ntBASIC5.94□□□□□ -1.46
NEK3P51956 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
NEK3P51956 RN7SKP157-201ENST00000516174 282 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms