Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.45□□□□□ -1.54
LHX1P48742 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.45□□□□□ -1.54
LHX1P48742 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.45□□□□□ -1.54
LHX1P48742 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.45□□□□□ -1.54
LHX1P48742 AC108751.3-201ENST00000461814 1020 ntBASIC5.45□□□□□ -1.54
LHX1P48742 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.45□□□□□ -1.54
LHX1P48742 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.45□□□□□ -1.54
LHX1P48742 AC022336.1-201ENST00000475510 337 ntBASIC5.45□□□□□ -1.54
LHX1P48742 AC093270.2-201ENST00000486157 792 ntBASIC5.45□□□□□ -1.54
LHX1P48742 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LHX1P48742 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.45□□□□□ -1.54
LHX1P48742 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.45□□□□□ -1.54
LHX1P48742 SEC11B-201ENST00000518383 499 ntBASIC5.45□□□□□ -1.54
LHX1P48742 OR7E10P-201ENST00000526420 991 ntBASIC5.45□□□□□ -1.54
LHX1P48742 AP000676.2-201ENST00000529711 301 ntBASIC5.45□□□□□ -1.54
LHX1P48742 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.45□□□□□ -1.54
LHX1P48742 OR7E128P-201ENST00000532736 1024 ntBASIC5.45□□□□□ -1.54
LHX1P48742 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.45□□□□□ -1.54
LHX1P48742 AL121839.1-201ENST00000556233 1185 ntBASIC5.45□□□□□ -1.54
LHX1P48742 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.45□□□□□ -1.54
LHX1P48742 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LHX1P48742 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.45□□□□□ -1.54
LHX1P48742 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.45□□□□□ -1.54
LHX1P48742 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.45□□□□□ -1.54
LHX1P48742 BNIP3P35-201ENST00000604530 490 ntBASIC5.45□□□□□ -1.54
LHX1P48742 AP005432.2-201ENST00000608162 586 ntBASIC5.45□□□□□ -1.54
LHX1P48742 AL354696.1-201ENST00000614652 497 ntBASIC5.45□□□□□ -1.54
LHX1P48742 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX1P48742 OR51C1P-202ENST00000641159 1444 ntBASIC5.45□□□□□ -1.54
LHX1P48742 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LHX1P48742 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.45□□□□□ -1.54
LHX1P48742 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LHX1P48742 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX1P48742 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LHX1P48742 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LHX1P48742 AC131971.1-201ENST00000332881 1482 ntBASIC5.45□□□□□ -1.54
LHX1P48742 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
LHX1P48742 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LHX1P48742 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
LHX1P48742 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LHX1P48742 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX1P48742 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
LHX1P48742 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LHX1P48742 RNA5SP455-201ENST00000365190 119 ntBASIC5.44□□□□□ -1.54
LHX1P48742 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX1P48742 Z97832.1-201ENST00000402490 328 ntBASIC5.44□□□□□ -1.54
LHX1P48742 AL390316.1-201ENST00000406279 553 ntBASIC5.44□□□□□ -1.54
LHX1P48742 GJA6P-201ENST00000415117 1042 ntBASIC5.44□□□□□ -1.54
LHX1P48742 TRIM60P17-201ENST00000415181 719 ntBASIC5.44□□□□□ -1.54
LHX1P48742 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.44□□□□□ -1.54
LHX1P48742 AL034379.1-201ENST00000423216 253 ntBASIC5.44□□□□□ -1.54
LHX1P48742 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
LHX1P48742 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.44□□□□□ -1.54
LHX1P48742 MTCO1P51-201ENST00000427672 1060 ntBASIC5.44□□□□□ -1.54
LHX1P48742 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.44□□□□□ -1.54
LHX1P48742 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX1P48742 ARL4AP4-201ENST00000434170 518 ntBASIC5.44□□□□□ -1.54
LHX1P48742 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.44□□□□□ -1.54
LHX1P48742 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX1P48742 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.44□□□□□ -1.54
LHX1P48742 AL513343.1-201ENST00000451818 792 ntBASIC5.44□□□□□ -1.54
LHX1P48742 MTND2P3-201ENST00000452458 470 ntBASIC5.44□□□□□ -1.54
LHX1P48742 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LHX1P48742 COX6B1P5-201ENST00000509843 249 ntBASIC5.44□□□□□ -1.54
LHX1P48742 SNORA70.11-201ENST00000515987 138 ntBASIC5.44□□□□□ -1.54
LHX1P48742 SNORA70.13-201ENST00000516116 138 ntBASIC5.44□□□□□ -1.54
LHX1P48742 AC087272.1-201ENST00000523624 533 ntBASIC5.44□□□□□ -1.54
LHX1P48742 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.44□□□□□ -1.54
LHX1P48742 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.44□□□□□ -1.54
LHX1P48742 NMNAT1P1-201ENST00000554095 876 ntBASIC5.44□□□□□ -1.54
LHX1P48742 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.44□□□□□ -1.54
LHX1P48742 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.44□□□□□ -1.54
LHX1P48742 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.44□□□□□ -1.54
LHX1P48742 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX1P48742 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.44□□□□□ -1.54
LHX1P48742 AC090510.2-201ENST00000617465 629 ntBASIC5.44□□□□□ -1.54
LHX1P48742 MIR6730-201ENST00000622213 67 ntBASIC5.44□□□□□ -1.54
LHX1P48742 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.44□□□□□ -1.54
LHX1P48742 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.44□□□□□ -1.54
LHX1P48742 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.44□□□□□ -1.54
LHX1P48742 MUC2-202ENST00000613187 4845 ntBASIC5.44□□□□□ -1.54
LHX1P48742 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LHX1P48742 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
LHX1P48742 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
LHX1P48742 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LHX1P48742 OR10AB1P-202ENST00000641219 1686 ntBASIC5.43□□□□□ -1.54
LHX1P48742 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LHX1P48742 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LHX1P48742 SAMM50P1-201ENST00000455403 1399 ntBASIC5.43□□□□□ -1.54
LHX1P48742 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LHX1P48742 CASC19-260ENST00000641828 2001 ntBASIC5.43□□□□□ -1.54
LHX1P48742 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
LHX1P48742 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LHX1P48742 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.43□□□□□ -1.54
LHX1P48742 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.43□□□□□ -1.54
LHX1P48742 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LHX1P48742 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
LHX1P48742 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LHX1P48742 SNORA66-201ENST00000384792 133 ntBASIC5.43□□□□□ -1.54
LHX1P48742 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms