Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 AC127024.6-201ENST00000621598 424 ntBASIC5.09□□□□□ -1.59
KRT6CP48668 AP001005.3-201ENST00000622049 129 ntBASIC5.09□□□□□ -1.59
KRT6CP48668 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.09□□□□□ -1.59
KRT6CP48668 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.09□□□□□ -1.59
KRT6CP48668 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
KRT6CP48668 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
KRT6CP48668 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
KRT6CP48668 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.08□□□□□ -1.6
KRT6CP48668 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.08□□□□□ -1.6
KRT6CP48668 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
KRT6CP48668 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
KRT6CP48668 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
KRT6CP48668 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 RNA5SP335-201ENST00000363817 110 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 RNA5SP234-201ENST00000363916 119 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 RNU4-7P-201ENST00000364758 141 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 UBBP2-201ENST00000376781 231 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
KRT6CP48668 OR8V1P-201ENST00000395193 873 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 MIR1271-201ENST00000408537 86 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.08□□□□□ -1.6
KRT6CP48668 AC013470.3-201ENST00000420252 1194 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT6CP48668 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.08□□□□□ -1.6
KRT6CP48668 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 TMX2P1-201ENST00000436507 708 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 CYCSP24-201ENST00000445119 316 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 RPL31P20-201ENST00000449593 360 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 RANP1-206ENST00000455094 651 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT6CP48668 AC100832.1-201ENST00000471945 383 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 AC022795.1-201ENST00000473808 480 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT6CP48668 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.08□□□□□ -1.6
KRT6CP48668 AC006427.1-201ENST00000514359 712 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT6CP48668 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT6CP48668 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT6CP48668 AC022882.1-201ENST00000532142 501 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.08□□□□□ -1.6
KRT6CP48668 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.08□□□□□ -1.6
KRT6CP48668 RN7SL787P-201ENST00000613000 284 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 MIR6778-201ENST00000617912 73 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 MIR8080-201ENST00000622224 89 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 AP003499.2-201ENST00000624100 483 ntBASIC5.08□□□□□ -1.6
KRT6CP48668 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.08□□□□□ -1.6
KRT6CP48668 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
KRT6CP48668 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.08□□□□□ -1.6
KRT6CP48668 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.08□□□□□ -1.6
KRT6CP48668 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.08□□□□□ -1.6
KRT6CP48668 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
KRT6CP48668 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
KRT6CP48668 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRT6CP48668 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRT6CP48668 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.07□□□□□ -1.6
KRT6CP48668 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
KRT6CP48668 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
KRT6CP48668 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.07□□□□□ -1.6
KRT6CP48668 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
KRT6CP48668 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KRT6CP48668 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
KRT6CP48668 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.07□□□□□ -1.6
KRT6CP48668 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRT6CP48668 RN7SKP124-201ENST00000364730 341 ntBASIC5.07□□□□□ -1.6
KRT6CP48668 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRT6CP48668 GABARAPL3-201ENST00000412799 354 ntBASIC5.07□□□□□ -1.6
KRT6CP48668 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.07□□□□□ -1.6
KRT6CP48668 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.07□□□□□ -1.6
KRT6CP48668 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.07□□□□□ -1.6
KRT6CP48668 KCTD9P1-201ENST00000430462 1167 ntBASIC5.07□□□□□ -1.6
KRT6CP48668 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.07□□□□□ -1.6
KRT6CP48668 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.07□□□□□ -1.6
KRT6CP48668 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.07□□□□□ -1.6
KRT6CP48668 AC104634.1-201ENST00000452720 462 ntBASIC5.07□□□□□ -1.6
KRT6CP48668 AC021660.1-201ENST00000465006 554 ntBASIC5.07□□□□□ -1.6
KRT6CP48668 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.07□□□□□ -1.6
KRT6CP48668 BTG4P1-201ENST00000510421 183 ntBASIC5.07□□□□□ -1.6
KRT6CP48668 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.07□□□□□ -1.6
KRT6CP48668 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.07□□□□□ -1.6
KRT6CP48668 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.07□□□□□ -1.6
KRT6CP48668 AC027544.3-201ENST00000535082 757 ntBASIC5.07□□□□□ -1.6
KRT6CP48668 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
KRT6CP48668 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.07□□□□□ -1.6
KRT6CP48668 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.07□□□□□ -1.6
KRT6CP48668 AC022404.1-201ENST00000555320 273 ntBASIC5.07□□□□□ -1.6
KRT6CP48668 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms