Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 CYCSP11-201ENST00000436426 315 ntBASIC6.56□□□□□ -1.36
HOXC9P31274 AC012512.1-201ENST00000446594 718 ntBASIC6.56□□□□□ -1.36
HOXC9P31274 CEACAMP6-201ENST00000452007 574 ntBASIC6.56□□□□□ -1.36
HOXC9P31274 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXC9P31274 FTH1P2-201ENST00000466086 412 ntBASIC6.56□□□□□ -1.36
HOXC9P31274 AC093267.1-201ENST00000489176 961 ntBASIC6.56□□□□□ -1.36
HOXC9P31274 PRELID3BP5-201ENST00000508612 460 ntBASIC6.56□□□□□ -1.36
HOXC9P31274 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.56□□□□□ -1.36
HOXC9P31274 AC008676.3-201ENST00000521237 435 ntBASIC6.56□□□□□ -1.36
HOXC9P31274 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXC9P31274 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.56□□□□□ -1.36
HOXC9P31274 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXC9P31274 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXC9P31274 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXC9P31274 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXC9P31274 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXC9P31274 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXC9P31274 AC019193.2-201ENST00000610012 634 ntBASIC6.56□□□□□ -1.36
HOXC9P31274 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.56□□□□□ -1.36
HOXC9P31274 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.56□□□□□ -1.36
HOXC9P31274 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HOXC9P31274 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HOXC9P31274 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC9P31274 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.55□□□□□ -1.36
HOXC9P31274 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC9P31274 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC9P31274 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC9P31274 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HOXC9P31274 SMG1P7-201ENST00000565246 2704 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXC9P31274 MTHFD2P5-201ENST00000320415 844 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 SNORA62-201ENST00000365493 153 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC9P31274 SNORA70F-201ENST00000384142 135 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 AL049697.2-201ENST00000403708 294 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 RN7SKP106-201ENST00000410832 272 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXC9P31274 AC114755.2-201ENST00000413520 361 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 RPS27AP7-201ENST00000422792 455 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC9P31274 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXC9P31274 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC9P31274 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.55□□□□□ -1.36
HOXC9P31274 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC9P31274 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC9P31274 MTCYBP13-201ENST00000578634 1093 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 RPL26P30-202ENST00000602923 645 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 AC010424.2-201ENST00000607594 443 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 AL049794.2-201ENST00000616301 365 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 AC019206.1-201ENST00000621938 425 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HOXC9P31274 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HOXC9P31274 DHX40P1-201ENST00000588725 1412 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.55□□□□□ -1.36
HOXC9P31274 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC9P31274 SCARNA15-201ENST00000607520 4325 ntBASIC6.55□□□□□ -1.36
HOXC9P31274 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC9P31274 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC9P31274 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
HOXC9P31274 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HOXC9P31274 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXC9P31274 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC9P31274 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC9P31274 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC9P31274 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
HOXC9P31274 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HOXC9P31274 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXC9P31274 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC9P31274 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC9P31274 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC9P31274 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HOXC9P31274 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC9P31274 AC068538.1-201ENST00000376856 336 ntBASIC6.54□□□□□ -1.36
HOXC9P31274 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HOXC9P31274 P2RY10P2-201ENST00000416730 913 ntBASIC6.54□□□□□ -1.36
HOXC9P31274 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC9P31274 AL645608.4-201ENST00000423619 154 ntBASIC6.54□□□□□ -1.36
HOXC9P31274 NFYAP1-201ENST00000431953 972 ntBASIC6.54□□□□□ -1.36
HOXC9P31274 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXC9P31274 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC9P31274 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.54□□□□□ -1.36
HOXC9P31274 RPS5P7-201ENST00000456664 608 ntBASIC6.54□□□□□ -1.36
HOXC9P31274 snoU13.1-201ENST00000459157 104 ntBASIC6.54□□□□□ -1.36
HOXC9P31274 AL672167.3-201ENST00000465951 960 ntBASIC6.54□□□□□ -1.36
HOXC9P31274 OR2A3P-201ENST00000493774 953 ntBASIC6.54□□□□□ -1.36
HOXC9P31274 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.54□□□□□ -1.36
HOXC9P31274 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.54□□□□□ -1.36
HOXC9P31274 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXC9P31274 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC6.54□□□□□ -1.36
HOXC9P31274 RNU6-964P-201ENST00000516524 69 ntBASIC6.54□□□□□ -1.36
HOXC9P31274 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.54□□□□□ -1.36
HOXC9P31274 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXC9P31274 AC020658.4-201ENST00000613987 684 ntBASIC6.54□□□□□ -1.36
HOXC9P31274 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXC9P31274 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.54□□□□□ -1.36
HOXC9P31274 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC9P31274 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC9P31274 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HOXC9P31274 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.54□□□□□ -1.36
HOXC9P31274 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms