Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC093249.4-201ENST00000564755 259 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 AL049794.2-201ENST00000616301 365 ntBASIC5.79□□□□□ -1.48
COL4A5P29400 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.78□□□□□ -1.48
COL4A5P29400 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A5P29400 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A5P29400 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
COL4A5P29400 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A5P29400 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A5P29400 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.78□□□□□ -1.48
COL4A5P29400 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.78□□□□□ -1.48
COL4A5P29400 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A5P29400 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A5P29400 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
COL4A5P29400 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A5P29400 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A5P29400 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.78□□□□□ -1.48
COL4A5P29400 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
COL4A5P29400 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.78□□□□□ -1.48
COL4A5P29400 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.78□□□□□ -1.48
COL4A5P29400 AC025750.1-201ENST00000399891 379 ntBASIC5.78□□□□□ -1.48
COL4A5P29400 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.78□□□□□ -1.48
COL4A5P29400 RPL7AP25-201ENST00000423357 805 ntBASIC5.78□□□□□ -1.48
COL4A5P29400 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A5P29400 COX6CP13-201ENST00000428703 226 ntBASIC5.78□□□□□ -1.48
COL4A5P29400 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.78□□□□□ -1.48
COL4A5P29400 AC034236.1-201ENST00000469891 373 ntBASIC5.78□□□□□ -1.48
COL4A5P29400 RPSAP51-201ENST00000497462 645 ntBASIC5.78□□□□□ -1.48
COL4A5P29400 AC020593.1-201ENST00000507399 299 ntBASIC5.78□□□□□ -1.48
COL4A5P29400 AC021193.1-201ENST00000511607 420 ntBASIC5.78□□□□□ -1.48
COL4A5P29400 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.78□□□□□ -1.48
COL4A5P29400 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.78□□□□□ -1.48
COL4A5P29400 NDUFB4P11-201ENST00000560510 395 ntBASIC5.78□□□□□ -1.48
COL4A5P29400 AC116553.2-201ENST00000564203 463 ntBASIC5.78□□□□□ -1.48
COL4A5P29400 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A5P29400 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A5P29400 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.78□□□□□ -1.48
COL4A5P29400 STX3-208ENST00000641815 3236 ntBASIC5.77□□□□□ -1.48
COL4A5P29400 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
COL4A5P29400 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A5P29400 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
COL4A5P29400 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A5P29400 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A5P29400 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.77□□□□□ -1.49
COL4A5P29400 OR4K17-201ENST00000315543 1032 ntBASIC5.77□□□□□ -1.49
COL4A5P29400 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A5P29400 MIR23B-201ENST00000384832 97 ntBASIC5.77□□□□□ -1.49
COL4A5P29400 RPL7P57-201ENST00000423238 740 ntBASIC5.77□□□□□ -1.49
COL4A5P29400 RPL34P27-201ENST00000428810 349 ntBASIC5.77□□□□□ -1.49
COL4A5P29400 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A5P29400 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.77□□□□□ -1.49
COL4A5P29400 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.77□□□□□ -1.49
COL4A5P29400 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.77□□□□□ -1.49
COL4A5P29400 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.77□□□□□ -1.49
COL4A5P29400 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.77□□□□□ -1.49
COL4A5P29400 AL133338.2-201ENST00000604292 736 ntBASIC5.77□□□□□ -1.49
COL4A5P29400 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.77□□□□□ -1.49
COL4A5P29400 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
COL4A5P29400 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
COL4A5P29400 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A5P29400 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A5P29400 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.77□□□□□ -1.49
COL4A5P29400 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.77□□□□□ -1.49
COL4A5P29400 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A5P29400 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A5P29400 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.77□□□□□ -1.49
COL4A5P29400 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.77□□□□□ -1.49
COL4A5P29400 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC5.77□□□□□ -1.49
COL4A5P29400 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC5.76□□□□□ -1.49
COL4A5P29400 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A5P29400 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A5P29400 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COL4A5P29400 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL4A5P29400 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A5P29400 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A5P29400 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
COL4A5P29400 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A5P29400 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.76□□□□□ -1.49
COL4A5P29400 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL4A5P29400 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A5P29400 AC017079.1-201ENST00000333650 415 ntBASIC5.76□□□□□ -1.49
COL4A5P29400 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.76□□□□□ -1.49
COL4A5P29400 TRGV7-201ENST00000427089 353 ntBASIC5.76□□□□□ -1.49
COL4A5P29400 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.76□□□□□ -1.49
COL4A5P29400 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.76□□□□□ -1.49
COL4A5P29400 RPL7P19-201ENST00000469948 618 ntBASIC5.76□□□□□ -1.49
COL4A5P29400 RPL21P126-201ENST00000470049 478 ntBASIC5.76□□□□□ -1.49
COL4A5P29400 AC073073.1-201ENST00000493920 463 ntBASIC5.76□□□□□ -1.49
COL4A5P29400 IGLVIV-65-201ENST00000517313 360 ntBASIC5.76□□□□□ -1.49
COL4A5P29400 MRPL49P2-201ENST00000521066 465 ntBASIC5.76□□□□□ -1.49
COL4A5P29400 MTCYBP13-201ENST00000578634 1093 ntBASIC5.76□□□□□ -1.49
COL4A5P29400 AC069061.3-201ENST00000582254 823 ntBASIC5.76□□□□□ -1.49
COL4A5P29400 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A5P29400 AL445567.2-201ENST00000618935 498 ntBASIC5.76□□□□□ -1.49
COL4A5P29400 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COL4A5P29400 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.76□□□□□ -1.49
COL4A5P29400 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COL4A5P29400 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A5P29400 AC009643.2-201ENST00000603543 1448 ntBASIC5.76□□□□□ -1.49
COL4A5P29400 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.76□□□□□ -1.49
COL4A5P29400 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms