Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC7.67□□□□□ -1.18
RXRBP28702 AL008987.1-201ENST00000415528 237 ntBASIC7.67□□□□□ -1.18
RXRBP28702 MTND1P23-201ENST00000416931 372 ntBASIC7.67□□□□□ -1.18
RXRBP28702 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC7.67□□□□□ -1.18
RXRBP28702 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RXRBP28702 AC073052.1-201ENST00000440417 714 ntBASIC7.67□□□□□ -1.18
RXRBP28702 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC7.67□□□□□ -1.18
RXRBP28702 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC7.67□□□□□ -1.18
RXRBP28702 AL359385.1-201ENST00000456509 365 ntBASIC7.67□□□□□ -1.18
RXRBP28702 AC093899.1-201ENST00000457984 376 ntBASIC7.67□□□□□ -1.18
RXRBP28702 SRRM1P2-201ENST00000464531 1192 ntBASIC7.67□□□□□ -1.18
RXRBP28702 CREM-230ENST00000474931 626 ntTSL 2 BASIC7.67□□□□□ -1.18
RXRBP28702 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
RXRBP28702 NPM1P29-201ENST00000483112 803 ntBASIC7.67□□□□□ -1.18
RXRBP28702 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC7.67□□□□□ -1.18
RXRBP28702 IGLV2-34-201ENST00000490007 283 ntBASIC7.67□□□□□ -1.18
RXRBP28702 AC080014.1-201ENST00000496877 1201 ntBASIC7.67□□□□□ -1.18
RXRBP28702 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.67□□□□□ -1.18
RXRBP28702 AC034244.1-201ENST00000507687 207 ntBASIC7.67□□□□□ -1.18
RXRBP28702 LTV1P1-201ENST00000510683 1237 ntBASIC7.67□□□□□ -1.18
RXRBP28702 AC093752.1-206ENST00000511823 336 ntBASIC7.67□□□□□ -1.18
RXRBP28702 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC7.67□□□□□ -1.18
RXRBP28702 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC7.67□□□□□ -1.18
RXRBP28702 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC7.67□□□□□ -1.18
RXRBP28702 AL121579.2-201ENST00000555466 590 ntBASIC7.67□□□□□ -1.18
RXRBP28702 AC008015.1-201ENST00000555505 465 ntBASIC7.67□□□□□ -1.18
RXRBP28702 AC092868.3-201ENST00000560515 784 ntBASIC7.67□□□□□ -1.18
RXRBP28702 AC119403.2-201ENST00000590960 598 ntBASIC7.67□□□□□ -1.18
RXRBP28702 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC7.67□□□□□ -1.18
RXRBP28702 AC073387.2-201ENST00000604797 784 ntBASIC7.67□□□□□ -1.18
RXRBP28702 AC010738.1-201ENST00000604970 987 ntBASIC7.67□□□□□ -1.18
RXRBP28702 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.67□□□□□ -1.18
RXRBP28702 AL135786.2-201ENST00000608422 615 ntBASIC7.67□□□□□ -1.18
RXRBP28702 AC000068.2-201ENST00000608816 460 ntBASIC7.67□□□□□ -1.18
RXRBP28702 AP000254.1-201ENST00000609934 520 ntBASIC7.67□□□□□ -1.18
RXRBP28702 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC7.67□□□□□ -1.18
RXRBP28702 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC7.67□□□□□ -1.18
RXRBP28702 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
RXRBP28702 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RXRBP28702 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.67□□□□□ -1.18
RXRBP28702 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RXRBP28702 AC092451.3-201ENST00000625067 1343 ntBASIC7.67□□□□□ -1.18
RXRBP28702 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
RXRBP28702 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.67□□□□□ -1.18
RXRBP28702 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RXRBP28702 KARSP3-201ENST00000571212 1504 ntBASIC7.67□□□□□ -1.18
RXRBP28702 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
RXRBP28702 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
RXRBP28702 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
RXRBP28702 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RXRBP28702 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.66□□□□□ -1.18
RXRBP28702 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.66□□□□□ -1.18
RXRBP28702 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.66□□□□□ -1.18
RXRBP28702 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.66□□□□□ -1.18
RXRBP28702 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.66□□□□□ -1.18
RXRBP28702 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RXRBP28702 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
RXRBP28702 RNA5SP335-201ENST00000363817 110 ntBASIC7.66□□□□□ -1.18
RXRBP28702 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.66□□□□□ -1.18
RXRBP28702 AC068538.1-201ENST00000376856 336 ntBASIC7.66□□□□□ -1.18
RXRBP28702 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC7.66□□□□□ -1.18
RXRBP28702 DUTP5-201ENST00000406790 469 ntBASIC7.66□□□□□ -1.18
RXRBP28702 SNORA79B-201ENST00000410557 148 ntBASIC7.66□□□□□ -1.18
RXRBP28702 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.66□□□□□ -1.18
RXRBP28702 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.66□□□□□ -1.18
RXRBP28702 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC7.66□□□□□ -1.18
RXRBP28702 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC7.66□□□□□ -1.18
RXRBP28702 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.66□□□□□ -1.18
RXRBP28702 NPM1P25-201ENST00000429734 854 ntBASIC7.66□□□□□ -1.18
RXRBP28702 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC7.66□□□□□ -1.18
RXRBP28702 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC7.66□□□□□ -1.18
RXRBP28702 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
RXRBP28702 TAF9P1-201ENST00000445421 515 ntBASIC7.66□□□□□ -1.18
RXRBP28702 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC7.66□□□□□ -1.18
RXRBP28702 TAF9P2-201ENST00000454958 515 ntBASIC7.66□□□□□ -1.18
RXRBP28702 AC092691.2-201ENST00000461787 803 ntBASIC7.66□□□□□ -1.18
RXRBP28702 AC090543.1-201ENST00000492168 485 ntBASIC7.66□□□□□ -1.18
RXRBP28702 RN7SL591P-201ENST00000496150 292 ntBASIC7.66□□□□□ -1.18
RXRBP28702 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RXRBP28702 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC7.66□□□□□ -1.18
RXRBP28702 RNU6-491P-201ENST00000516099 110 ntBASIC7.66□□□□□ -1.18
RXRBP28702 SUMO2P19-201ENST00000518920 295 ntBASIC7.66□□□□□ -1.18
RXRBP28702 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC7.66□□□□□ -1.18
RXRBP28702 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC7.66□□□□□ -1.18
RXRBP28702 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.66□□□□□ -1.18
RXRBP28702 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.66□□□□□ -1.18
RXRBP28702 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RXRBP28702 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.66□□□□□ -1.18
RXRBP28702 AC068790.4-201ENST00000602474 263 ntBASIC7.66□□□□□ -1.18
RXRBP28702 AL133247.2-201ENST00000603236 482 ntBASIC7.66□□□□□ -1.18
RXRBP28702 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.66□□□□□ -1.18
RXRBP28702 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.66□□□□□ -1.18
RXRBP28702 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC7.66□□□□□ -1.18
RXRBP28702 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.66□□□□□ -1.18
RXRBP28702 AL356596.1-201ENST00000624230 379 ntBASIC7.66□□□□□ -1.18
RXRBP28702 AL359740.1-201ENST00000624340 592 ntBASIC7.66□□□□□ -1.18
RXRBP28702 DDX18P5-201ENST00000534547 1306 ntBASIC7.66□□□□□ -1.18
RXRBP28702 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RXRBP28702 AC092821.3-202ENST00000641304 2767 ntBASIC7.66□□□□□ -1.18
RXRBP28702 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms