Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 UBL5P3-201ENST00000475112 231 ntBASIC1.9□□□□□ -2.11
NEBP20929 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC1.9□□□□□ -2.11
NEBP20929 AP005403.1-201ENST00000579720 229 ntBASIC1.9□□□□□ -2.11
NEBP20929 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC1.9□□□□□ -2.11
NEBP20929 AL590240.3-201ENST00000621416 943 ntBASIC1.9□□□□□ -2.11
NEBP20929 AC112484.5-201ENST00000624189 228 ntBASIC1.9□□□□□ -2.11
NEBP20929 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.9□□□□□ -2.11
NEBP20929 AC093671.1-201ENST00000624981 2929 ntBASIC1.9□□□□□ -2.11
NEBP20929 AC068647.1-201ENST00000489539 2265 ntBASIC1.9□□□□□ -2.11
NEBP20929 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
NEBP20929 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
NEBP20929 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NEBP20929 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
NEBP20929 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC1.9□□□□□ -2.11
NEBP20929 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
NEBP20929 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
NEBP20929 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
NEBP20929 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NEBP20929 MAPK6PS6-201ENST00000420752 1053 ntBASIC1.9□□□□□ -2.11
NEBP20929 DNAJA1P6-201ENST00000437347 354 ntBASIC1.9□□□□□ -2.11
NEBP20929 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC1.9□□□□□ -2.11
NEBP20929 TRMT10BP1-201ENST00000519377 943 ntBASIC1.9□□□□□ -2.11
NEBP20929 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC1.9□□□□□ -2.11
NEBP20929 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC1.9□□□□□ -2.11
NEBP20929 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC1.9□□□□□ -2.11
NEBP20929 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC1.9□□□□□ -2.11
NEBP20929 MIR4425-201ENST00000580572 84 ntBASIC1.9□□□□□ -2.11
NEBP20929 AC006023.1-201ENST00000603944 259 ntBASIC1.9□□□□□ -2.11
NEBP20929 MIR7975-201ENST00000619350 68 ntBASIC1.9□□□□□ -2.11
NEBP20929 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NEBP20929 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NEBP20929 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NEBP20929 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
NEBP20929 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC1.9□□□□□ -2.11
NEBP20929 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NEBP20929 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NEBP20929 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
NEBP20929 AC105114.1-201ENST00000624795 1862 ntBASIC1.9□□□□□ -2.11
NEBP20929 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NEBP20929 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NEBP20929 AL451142.1-201ENST00000375867 775 ntBASIC1.89□□□□□ -2.11
NEBP20929 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NEBP20929 RPL23AP17-201ENST00000401064 499 ntBASIC1.89□□□□□ -2.11
NEBP20929 ATP5F1P6-201ENST00000402768 767 ntBASIC1.89□□□□□ -2.11
NEBP20929 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 AC117395.1-201ENST00000487390 403 ntBASIC1.89□□□□□ -2.11
NEBP20929 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC1.89□□□□□ -2.11
NEBP20929 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC1.89□□□□□ -2.11
NEBP20929 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NEBP20929 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC1.89□□□□□ -2.11
NEBP20929 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC1.89□□□□□ -2.11
NEBP20929 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NEBP20929 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NEBP20929 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC1.89□□□□□ -2.11
NEBP20929 AC145138.1-201ENST00000512908 2851 ntBASIC1.89□□□□□ -2.11
NEBP20929 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC1.89□□□□□ -2.11
NEBP20929 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC1.89□□□□□ -2.11
NEBP20929 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC1.89□□□□□ -2.11
NEBP20929 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
NEBP20929 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
NEBP20929 RNA5SP267-201ENST00000364893 126 ntBASIC1.89□□□□□ -2.11
NEBP20929 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC1.89□□□□□ -2.11
NEBP20929 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC1.89□□□□□ -2.11
NEBP20929 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC1.89□□□□□ -2.11
NEBP20929 AC022336.1-201ENST00000475510 337 ntBASIC1.89□□□□□ -2.11
NEBP20929 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC1.89□□□□□ -2.11
NEBP20929 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.89□□□□□ -2.11
NEBP20929 DPPA3P2-201ENST00000553589 478 ntBASIC1.89□□□□□ -2.11
NEBP20929 RN7SL356P-201ENST00000582228 248 ntBASIC1.89□□□□□ -2.11
NEBP20929 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 AC055839.1-201ENST00000634467 498 ntBASIC1.89□□□□□ -2.11
NEBP20929 COL4A4-201ENST00000396625 9895 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NEBP20929 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
NEBP20929 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NEBP20929 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 ASNSP3-201ENST00000451989 1306 ntBASIC1.89□□□□□ -2.11
NEBP20929 MFSD8-239ENST00000641590 2479 ntBASIC1.89□□□□□ -2.11
NEBP20929 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NEBP20929 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NEBP20929 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NEBP20929 RPS29P10-201ENST00000439197 166 ntBASIC1.89□□□□□ -2.11
NEBP20929 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC1.89□□□□□ -2.11
NEBP20929 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC1.89□□□□□ -2.11
NEBP20929 TCP11X3P-202ENST00000514289 1254 ntBASIC1.89□□□□□ -2.11
NEBP20929 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC1.89□□□□□ -2.11
NEBP20929 AL133338.2-201ENST00000604292 736 ntBASIC1.89□□□□□ -2.11
NEBP20929 AC103710.3-201ENST00000608157 948 ntBASIC1.89□□□□□ -2.11
NEBP20929 OR51C1P-201ENST00000608504 942 ntBASIC1.89□□□□□ -2.11
NEBP20929 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC1.89□□□□□ -2.11
NEBP20929 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms