Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
HMGA1P17096 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HMGA1P17096 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
HMGA1P17096 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGA1P17096 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGA1P17096 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HMGA1P17096 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGA1P17096 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGA1P17096 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGA1P17096 AC068446.1-201ENST00000556425 1549 ntBASIC5.08□□□□□ -1.6
HMGA1P17096 AC004817.4-201ENST00000602396 3625 ntBASIC5.08□□□□□ -1.6
HMGA1P17096 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HMGA1P17096 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGA1P17096 TRIM51GP-201ENST00000534741 1350 ntBASIC5.08□□□□□ -1.6
HMGA1P17096 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.08□□□□□ -1.6
HMGA1P17096 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
HMGA1P17096 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGA1P17096 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HMGA1P17096 MIR141-201ENST00000384975 95 ntBASIC5.08□□□□□ -1.6
HMGA1P17096 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGA1P17096 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGA1P17096 AC119751.6-201ENST00000416712 186 ntBASIC5.08□□□□□ -1.6
HMGA1P17096 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.08□□□□□ -1.6
HMGA1P17096 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.08□□□□□ -1.6
HMGA1P17096 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HMGA1P17096 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGA1P17096 TPT1P13-201ENST00000449760 499 ntBASIC5.08□□□□□ -1.6
HMGA1P17096 RPL12P20-201ENST00000475538 479 ntBASIC5.08□□□□□ -1.6
HMGA1P17096 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGA1P17096 RPL5P22-201ENST00000480199 884 ntBASIC5.08□□□□□ -1.6
HMGA1P17096 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGA1P17096 BUD31P1-201ENST00000521828 359 ntBASIC5.08□□□□□ -1.6
HMGA1P17096 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGA1P17096 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGA1P17096 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.08□□□□□ -1.6
HMGA1P17096 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.08□□□□□ -1.6
HMGA1P17096 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.08□□□□□ -1.6
HMGA1P17096 ELOCP28-201ENST00000590044 317 ntBASIC5.08□□□□□ -1.6
HMGA1P17096 FAM27B-201ENST00000610601 213 ntBASIC5.08□□□□□ -1.6
HMGA1P17096 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGA1P17096 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGA1P17096 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.08□□□□□ -1.6
HMGA1P17096 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
HMGA1P17096 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGA1P17096 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
HMGA1P17096 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.08□□□□□ -1.6
HMGA1P17096 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HMGA1P17096 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HMGA1P17096 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.07□□□□□ -1.6
HMGA1P17096 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.07□□□□□ -1.6
HMGA1P17096 AC063976.2-201ENST00000425667 3556 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HMGA1P17096 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HMGA1P17096 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMGA1P17096 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGA1P17096 RNU1-32P-201ENST00000363937 159 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGA1P17096 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.07□□□□□ -1.6
HMGA1P17096 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HMGA1P17096 ADAM24P-201ENST00000398655 2101 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 MIR298-201ENST00000401212 88 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 PCNPP4-201ENST00000414817 517 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.07□□□□□ -1.6
HMGA1P17096 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.07□□□□□ -1.6
HMGA1P17096 NDUFA12P1-201ENST00000455914 406 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGA1P17096 RN7SL517P-201ENST00000462240 305 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 RN7SL346P-201ENST00000491561 294 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.07□□□□□ -1.6
HMGA1P17096 OR5M2P-201ENST00000529003 936 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGA1P17096 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.07□□□□□ -1.6
HMGA1P17096 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.07□□□□□ -1.6
HMGA1P17096 AC018552.1-201ENST00000562099 811 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 RN7SL802P-201ENST00000577858 299 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 AL121932.1-201ENST00000605542 214 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 MIR6810-201ENST00000622701 70 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 AC010435.1-201ENST00000623353 1177 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 MIR7641-1-201ENST00000627518 61 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGA1P17096 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HMGA1P17096 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.07□□□□□ -1.6
HMGA1P17096 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
HMGA1P17096 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGA1P17096 SMG1P6-201ENST00000532337 2930 ntBASIC5.07□□□□□ -1.6
HMGA1P17096 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMGA1P17096 Z98755.1-201ENST00000407015 1384 ntBASIC5.06□□□□□ -1.6
HMGA1P17096 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
HMGA1P17096 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGA1P17096 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HMGA1P17096 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGA1P17096 AL590240.1-201ENST00000334118 313 ntBASIC5.06□□□□□ -1.6
HMGA1P17096 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGA1P17096 GLULP6-201ENST00000399502 913 ntBASIC5.06□□□□□ -1.6
HMGA1P17096 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGA1P17096 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HMGA1P17096 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGA1P17096 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HMGA1P17096 AC104971.1-201ENST00000495117 578 ntBASIC5.06□□□□□ -1.6
HMGA1P17096 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms