Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.49□□□□□ -1.69
FREM3P0C091 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.49□□□□□ -1.69
FREM3P0C091 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.49□□□□□ -1.69
FREM3P0C091 AC103968.1-201ENST00000557841 573 ntBASIC4.49□□□□□ -1.69
FREM3P0C091 AC116553.2-201ENST00000564203 463 ntBASIC4.49□□□□□ -1.69
FREM3P0C091 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.49□□□□□ -1.69
FREM3P0C091 MIR6748-201ENST00000610433 71 ntBASIC4.49□□□□□ -1.69
FREM3P0C091 AC108359.1-201ENST00000616451 1211 ntBASIC4.49□□□□□ -1.69
FREM3P0C091 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.49□□□□□ -1.69
FREM3P0C091 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.49□□□□□ -1.69
FREM3P0C091 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
FREM3P0C091 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FREM3P0C091 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FREM3P0C091 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
FREM3P0C091 NCLP2-201ENST00000416078 1462 ntBASIC4.49□□□□□ -1.69
FREM3P0C091 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FREM3P0C091 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.49□□□□□ -1.69
FREM3P0C091 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FREM3P0C091 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
FREM3P0C091 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.49□□□□□ -1.69
FREM3P0C091 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
FREM3P0C091 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.49□□□□□ -1.69
FREM3P0C091 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FREM3P0C091 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
FREM3P0C091 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.49□□□□□ -1.69
FREM3P0C091 NPM1P40-201ENST00000412758 733 ntBASIC4.49□□□□□ -1.69
FREM3P0C091 ATG4AP1-201ENST00000416893 538 ntBASIC4.49□□□□□ -1.69
FREM3P0C091 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.49□□□□□ -1.69
FREM3P0C091 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.49□□□□□ -1.69
FREM3P0C091 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.49□□□□□ -1.69
FREM3P0C091 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
FREM3P0C091 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.49□□□□□ -1.69
FREM3P0C091 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FREM3P0C091 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.49□□□□□ -1.69
FREM3P0C091 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
FREM3P0C091 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.49□□□□□ -1.69
FREM3P0C091 AC010503.3-201ENST00000594355 540 ntBASIC4.49□□□□□ -1.69
FREM3P0C091 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.49□□□□□ -1.69
FREM3P0C091 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.49□□□□□ -1.69
FREM3P0C091 AC018695.5-201ENST00000605872 315 ntBASIC4.49□□□□□ -1.69
FREM3P0C091 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
FREM3P0C091 AC011447.7-201ENST00000624228 1590 ntBASIC4.49□□□□□ -1.69
FREM3P0C091 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.49□□□□□ -1.69
FREM3P0C091 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
FREM3P0C091 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FREM3P0C091 AL121839.2-201ENST00000565058 6943 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.48□□□□□ -1.69
FREM3P0C091 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FREM3P0C091 RN7SKP103-201ENST00000363848 320 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
FREM3P0C091 SNORA56-201ENST00000383966 129 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 AL049697.2-201ENST00000403708 294 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 RNA5SP113-201ENST00000410486 84 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 AL645608.4-201ENST00000423619 154 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.48□□□□□ -1.69
FREM3P0C091 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.48□□□□□ -1.69
FREM3P0C091 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.48□□□□□ -1.69
FREM3P0C091 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC4.48□□□□□ -1.69
FREM3P0C091 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.48□□□□□ -1.69
FREM3P0C091 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.48□□□□□ -1.69
FREM3P0C091 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FREM3P0C091 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.48□□□□□ -1.69
FREM3P0C091 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FREM3P0C091 AC022417.1-201ENST00000624768 1303 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FREM3P0C091 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FREM3P0C091 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FREM3P0C091 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FREM3P0C091 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
FREM3P0C091 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
FREM3P0C091 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.48□□□□□ -1.69
FREM3P0C091 AL731532.2-201ENST00000623542 1953 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
FREM3P0C091 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
FREM3P0C091 SNORA73.1-201ENST00000363107 205 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 SNORA66-201ENST00000384792 133 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
FREM3P0C091 RN7SKP100-201ENST00000411258 284 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.48□□□□□ -1.69
FREM3P0C091 PRPF38AP2-201ENST00000438179 851 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 RN7SL860P-201ENST00000473738 223 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.48□□□□□ -1.69
FREM3P0C091 AC127024.5-201ENST00000580085 462 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.48□□□□□ -1.69
FREM3P0C091 AC011487.3-201ENST00000593607 453 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 uc_338.18-201ENST00000615451 175 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 AL022401.1-201ENST00000619498 108 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 MIR7641-1-201ENST00000627518 61 ntBASIC4.48□□□□□ -1.69
FREM3P0C091 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FREM3P0C091 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FREM3P0C091 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FREM3P0C091 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
FREM3P0C091 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FREM3P0C091 AC104623.2-202ENST00000623477 4002 ntBASIC4.47□□□□□ -1.69
FREM3P0C091 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
FREM3P0C091 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FREM3P0C091 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.47□□□□□ -1.69
FREM3P0C091 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.47□□□□□ -1.69
FREM3P0C091 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
FREM3P0C091 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms