Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
MMP3P08254 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MMP3P08254 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MMP3P08254 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
MMP3P08254 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.77□□□□□ -1.49
MMP3P08254 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MMP3P08254 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
MMP3P08254 CCNB2P1-201ENST00000399411 1150 ntBASIC5.77□□□□□ -1.49
MMP3P08254 MTND4LP21-201ENST00000415303 295 ntBASIC5.77□□□□□ -1.49
MMP3P08254 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.77□□□□□ -1.49
MMP3P08254 RPL26P29-201ENST00000415623 438 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AC096644.3-201ENST00000416788 338 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AC017019.1-201ENST00000426129 261 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AL161722.2-201ENST00000434731 981 ntBASIC5.77□□□□□ -1.49
MMP3P08254 NOP56P2-201ENST00000447491 769 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.77□□□□□ -1.49
MMP3P08254 MTND5P8-201ENST00000449817 1083 ntBASIC5.77□□□□□ -1.49
MMP3P08254 GYG1P1-201ENST00000460864 698 ntBASIC5.77□□□□□ -1.49
MMP3P08254 RPL7P41-201ENST00000485823 957 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.77□□□□□ -1.49
MMP3P08254 IGBP1P4-201ENST00000503202 879 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AC106806.2-201ENST00000509365 500 ntBASIC5.77□□□□□ -1.49
MMP3P08254 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
MMP3P08254 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.77□□□□□ -1.49
MMP3P08254 AC021006.3-201ENST00000530771 192 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.77□□□□□ -1.49
MMP3P08254 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MMP3P08254 AC137768.1-201ENST00000549998 553 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.77□□□□□ -1.49
MMP3P08254 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.77□□□□□ -1.49
MMP3P08254 AC009117.1-201ENST00000563948 554 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AC010547.7-201ENST00000570323 333 ntBASIC5.77□□□□□ -1.49
MMP3P08254 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
MMP3P08254 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
MMP3P08254 AP001357.1-201ENST00000586304 1053 ntBASIC5.77□□□□□ -1.49
MMP3P08254 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.77□□□□□ -1.49
MMP3P08254 AC090330.1-201ENST00000588646 764 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.77□□□□□ -1.49
MMP3P08254 AC005776.1-201ENST00000603164 290 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AL139022.2-201ENST00000606934 443 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.77□□□□□ -1.49
MMP3P08254 AC084824.5-201ENST00000612009 413 ntBASIC5.77□□□□□ -1.49
MMP3P08254 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AP006248.3-201ENST00000623580 594 ntBASIC5.77□□□□□ -1.49
MMP3P08254 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.77□□□□□ -1.49
MMP3P08254 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
MMP3P08254 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MMP3P08254 AL592494.2-201ENST00000425455 1548 ntBASIC5.77□□□□□ -1.49
MMP3P08254 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MMP3P08254 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.77□□□□□ -1.49
MMP3P08254 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.77□□□□□ -1.49
MMP3P08254 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MMP3P08254 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.77□□□□□ -1.49
MMP3P08254 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MMP3P08254 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MMP3P08254 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MMP3P08254 AL442128.2-201ENST00000620246 1824 ntBASIC5.76□□□□□ -1.49
MMP3P08254 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
MMP3P08254 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.76□□□□□ -1.49
MMP3P08254 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MMP3P08254 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
MMP3P08254 RNU4-39P-201ENST00000362455 127 ntBASIC5.76□□□□□ -1.49
MMP3P08254 RNVU1-6-201ENST00000364688 164 ntBASIC5.76□□□□□ -1.49
MMP3P08254 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.76□□□□□ -1.49
MMP3P08254 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MMP3P08254 MGAT2P2-201ENST00000427194 797 ntBASIC5.76□□□□□ -1.49
MMP3P08254 AC092017.2-201ENST00000427600 362 ntBASIC5.76□□□□□ -1.49
MMP3P08254 USP9YP9-201ENST00000429406 715 ntBASIC5.76□□□□□ -1.49
MMP3P08254 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.76□□□□□ -1.49
MMP3P08254 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.76□□□□□ -1.49
MMP3P08254 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.76□□□□□ -1.49
MMP3P08254 AC008072.1-201ENST00000434254 824 ntBASIC5.76□□□□□ -1.49
MMP3P08254 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.76□□□□□ -1.49
MMP3P08254 AC009963.4-201ENST00000448535 339 ntBASIC5.76□□□□□ -1.49
MMP3P08254 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
MMP3P08254 snoU13.29-201ENST00000459370 104 ntBASIC5.76□□□□□ -1.49
MMP3P08254 AC140172.1-201ENST00000502928 141 ntBASIC5.76□□□□□ -1.49
MMP3P08254 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.76□□□□□ -1.49
MMP3P08254 COX6B1P5-201ENST00000509843 249 ntBASIC5.76□□□□□ -1.49
MMP3P08254 BTF3P13-201ENST00000513224 490 ntBASIC5.76□□□□□ -1.49
MMP3P08254 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
MMP3P08254 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.76□□□□□ -1.49
MMP3P08254 AC125494.2-201ENST00000602431 657 ntBASIC5.76□□□□□ -1.49
MMP3P08254 AP005432.2-201ENST00000608162 586 ntBASIC5.76□□□□□ -1.49
MMP3P08254 AC074276.2-201ENST00000619891 348 ntBASIC5.76□□□□□ -1.49
MMP3P08254 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.76□□□□□ -1.49
MMP3P08254 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.76□□□□□ -1.49
MMP3P08254 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
MMP3P08254 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.76□□□□□ -1.49
MMP3P08254 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
MMP3P08254 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.76□□□□□ -1.49
MMP3P08254 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
MMP3P08254 HSPA8P14-201ENST00000552265 1805 ntBASIC5.76□□□□□ -1.49
MMP3P08254 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MMP3P08254 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
MMP3P08254 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
MMP3P08254 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
MMP3P08254 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.75□□□□□ -1.49
MMP3P08254 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
MMP3P08254 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms