Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 OTX2P1-201ENST00000450956 354 ntBASIC4.16□□□□□ -1.74
CTSDP07339 RPS17P2-201ENST00000461663 408 ntBASIC4.16□□□□□ -1.74
CTSDP07339 RN7SL517P-201ENST00000462240 305 ntBASIC4.16□□□□□ -1.74
CTSDP07339 RN7SL799P-201ENST00000475891 298 ntBASIC4.16□□□□□ -1.74
CTSDP07339 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.16□□□□□ -1.74
CTSDP07339 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CTSDP07339 TCP11X3P-202ENST00000514289 1254 ntBASIC4.16□□□□□ -1.74
CTSDP07339 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.16□□□□□ -1.74
CTSDP07339 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.16□□□□□ -1.74
CTSDP07339 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.16□□□□□ -1.74
CTSDP07339 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.16□□□□□ -1.74
CTSDP07339 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.16□□□□□ -1.74
CTSDP07339 IMMP1LP1-201ENST00000605170 488 ntBASIC4.16□□□□□ -1.74
CTSDP07339 RNA5SP440-201ENST00000612665 119 ntBASIC4.16□□□□□ -1.74
CTSDP07339 WBP1LP8-201ENST00000617401 327 ntBASIC4.16□□□□□ -1.74
CTSDP07339 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.16□□□□□ -1.74
CTSDP07339 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CTSDP07339 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CTSDP07339 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTSDP07339 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTSDP07339 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
CTSDP07339 MTCO1P15-201ENST00000529569 1526 ntBASIC4.16□□□□□ -1.74
CTSDP07339 THAP12P8-201ENST00000447914 2115 ntBASIC4.15□□□□□ -1.74
CTSDP07339 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.15□□□□□ -1.74
CTSDP07339 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.15□□□□□ -1.74
CTSDP07339 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTSDP07339 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTSDP07339 RNU1-149P-201ENST00000390870 161 ntBASIC4.15□□□□□ -1.75
CTSDP07339 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.15□□□□□ -1.75
CTSDP07339 MIR1182-201ENST00000408363 97 ntBASIC4.15□□□□□ -1.75
CTSDP07339 SNORA11.3-201ENST00000408471 128 ntBASIC4.15□□□□□ -1.75
CTSDP07339 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.15□□□□□ -1.75
CTSDP07339 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.15□□□□□ -1.75
CTSDP07339 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.15□□□□□ -1.75
CTSDP07339 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.15□□□□□ -1.75
CTSDP07339 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.15□□□□□ -1.75
CTSDP07339 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.15□□□□□ -1.75
CTSDP07339 EI24P4-201ENST00000423683 1078 ntBASIC4.15□□□□□ -1.75
CTSDP07339 SETP10-201ENST00000424368 814 ntBASIC4.15□□□□□ -1.75
CTSDP07339 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.15□□□□□ -1.75
CTSDP07339 AC092162.1-201ENST00000432828 434 ntBASIC4.15□□□□□ -1.75
CTSDP07339 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.15□□□□□ -1.75
CTSDP07339 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.15□□□□□ -1.75
CTSDP07339 AC073052.1-201ENST00000440417 714 ntBASIC4.15□□□□□ -1.75
CTSDP07339 AP000281.1-201ENST00000444036 316 ntBASIC4.15□□□□□ -1.75
CTSDP07339 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.15□□□□□ -1.75
CTSDP07339 HMGB1P4-201ENST00000455362 567 ntBASIC4.15□□□□□ -1.75
CTSDP07339 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.15□□□□□ -1.75
CTSDP07339 RPS27AP2-201ENST00000457576 465 ntBASIC4.15□□□□□ -1.75
CTSDP07339 AL133445.1-201ENST00000467051 452 ntBASIC4.15□□□□□ -1.75
CTSDP07339 RN7SL717P-201ENST00000478343 297 ntBASIC4.15□□□□□ -1.75
CTSDP07339 ARL4AP1-201ENST00000503220 705 ntBASIC4.15□□□□□ -1.75
CTSDP07339 IGLVIV-64-201ENST00000518581 301 ntBASIC4.15□□□□□ -1.75
CTSDP07339 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.15□□□□□ -1.75
CTSDP07339 AC024940.3-201ENST00000538551 316 ntBASIC4.15□□□□□ -1.75
CTSDP07339 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.15□□□□□ -1.75
CTSDP07339 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.15□□□□□ -1.75
CTSDP07339 MIR1273E-201ENST00000581165 102 ntBASIC4.15□□□□□ -1.75
CTSDP07339 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.15□□□□□ -1.75
CTSDP07339 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.15□□□□□ -1.75
CTSDP07339 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CTSDP07339 AC104695.2-201ENST00000605056 775 ntBASIC4.15□□□□□ -1.75
CTSDP07339 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.15□□□□□ -1.75
CTSDP07339 RPSAP73-201ENST00000614820 330 ntBASIC4.15□□□□□ -1.75
CTSDP07339 SNORA11.6-201ENST00000619030 128 ntBASIC4.15□□□□□ -1.75
CTSDP07339 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CTSDP07339 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.15□□□□□ -1.75
CTSDP07339 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.15□□□□□ -1.75
CTSDP07339 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.15□□□□□ -1.75
CTSDP07339 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CTSDP07339 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTSDP07339 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTSDP07339 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CTSDP07339 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CTSDP07339 DDX18P4-201ENST00000511690 1966 ntBASIC4.14□□□□□ -1.75
CTSDP07339 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
CTSDP07339 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTSDP07339 AC009643.2-201ENST00000603543 1448 ntBASIC4.14□□□□□ -1.75
CTSDP07339 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CTSDP07339 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.14□□□□□ -1.75
CTSDP07339 AP001273.1-201ENST00000624493 3152 ntBASIC4.14□□□□□ -1.75
CTSDP07339 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTSDP07339 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTSDP07339 RNA5SP234-201ENST00000363916 119 ntBASIC4.14□□□□□ -1.75
CTSDP07339 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CTSDP07339 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.14□□□□□ -1.75
CTSDP07339 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.14□□□□□ -1.75
CTSDP07339 AL513325.1-201ENST00000417716 1034 ntBASIC4.14□□□□□ -1.75
CTSDP07339 AL390119.1-201ENST00000440329 312 ntBASIC4.14□□□□□ -1.75
CTSDP07339 RPS29P9-201ENST00000440360 171 ntBASIC4.14□□□□□ -1.75
CTSDP07339 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.14□□□□□ -1.75
CTSDP07339 RPSAP39-201ENST00000467439 883 ntBASIC4.14□□□□□ -1.75
CTSDP07339 RPL7P6-201ENST00000480903 738 ntBASIC4.14□□□□□ -1.75
CTSDP07339 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.14□□□□□ -1.75
CTSDP07339 GTF2F2P1-201ENST00000511083 675 ntBASIC4.14□□□□□ -1.75
CTSDP07339 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.14□□□□□ -1.75
CTSDP07339 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.14□□□□□ -1.75
CTSDP07339 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.14□□□□□ -1.75
CTSDP07339 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CTSDP07339 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms