Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDH17O14917 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 AC007996.1-201ENST00000620414 2821 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 CR788268.1-201ENST00000603931 1809 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 FBXL21-201ENST00000297158 1305 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PCDH17O14917 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 U3.25-201ENST00000391209 220 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 RPL5P19-201ENST00000404228 893 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 AC245060.4-201ENST00000413293 1121 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 AC126120.1-201ENST00000431082 470 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 DEFA9P-201ENST00000433042 285 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 PCBP2P1-201ENST00000437262 977 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH17O14917 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 AL358794.1-201ENST00000445689 381 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 RPL36AP39-201ENST00000445859 318 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 SDC4P-201ENST00000453285 601 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDH17O14917 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDH17O14917 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH17O14917 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH17O14917 AC097486.1-201ENST00000515331 210 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 AC034205.1-201ENST00000520621 638 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDH17O14917 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH17O14917 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 AC122134.1-201ENST00000565664 1104 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 AL163952.1-202ENST00000569625 600 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 MIR4789-201ENST00000577469 82 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 MIR4443-201ENST00000585052 53 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 AC006116.5-201ENST00000591936 559 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH17O14917 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH17O14917 RNA5SP440-201ENST00000612665 119 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 RNA5SP439-201ENST00000617595 124 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 MIR6826-201ENST00000617808 98 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 AC021106.3-201ENST00000623925 531 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PCDH17O14917 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 LINC01963-201ENST00000562038 3148 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
PCDH17O14917 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH17O14917 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 AC004076.2-201ENST00000620532 3323 ntBASIC5.53□□□□□ -1.52
PCDH17O14917 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH17O14917 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
PCDH17O14917 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 AC130304.1-201ENST00000622942 2385 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 AC144833.1-201ENST00000567953 4089 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 CASC19-284ENST00000642142 1868 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH17O14917 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 VN2R3P-201ENST00000422626 1412 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH17O14917 RNU5B-1-201ENST00000363286 116 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 MIR320B1-201ENST00000390209 79 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 DNAJC19P6-201ENST00000401853 280 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms