Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC28A1O00337 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC28A1O00337 GTF3AP5-201ENST00000442645 697 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC28A1O00337 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC28A1O00337 MRPL35P2-201ENST00000448009 511 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC28A1O00337 HSPE1P22-201ENST00000456856 327 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 EIF2S2P4-201ENST00000461070 984 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC28A1O00337 AC091180.1-201ENST00000462104 372 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 RPSAP39-201ENST00000467439 883 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AC097173.1-201ENST00000505862 819 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC28A1O00337 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC28A1O00337 AC067904.2-201ENST00000517322 1283 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AC105031.1-201ENST00000518550 476 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC28A1O00337 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.99□□□□□ -1.61
SLC28A1O00337 EIF4A2P5-201ENST00000529914 499 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AC027544.3-201ENST00000535082 757 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC28A1O00337 AC092868.3-201ENST00000560515 784 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 RPL10P14-201ENST00000565265 298 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 MIR4675-201ENST00000577898 77 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.99□□□□□ -1.61
SLC28A1O00337 BMS1P7-201ENST00000602440 1052 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AC104695.2-201ENST00000605056 775 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AC019131.2-201ENST00000609071 870 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC28A1O00337 AC127024.6-201ENST00000621598 424 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.99□□□□□ -1.61
SLC28A1O00337 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC28A1O00337 AC135068.12-201ENST00000637370 931 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.99□□□□□ -1.61
SLC28A1O00337 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.99□□□□□ -1.61
SLC28A1O00337 CASC19-221ENST00000641309 1382 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 OR55B1P-203ENST00000641518 2602 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.99□□□□□ -1.61
SLC28A1O00337 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SLC28A1O00337 AL606537.1-201ENST00000607258 2011 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SLC28A1O00337 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SLC28A1O00337 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.99□□□□□ -1.61
SLC28A1O00337 AC100778.3-201ENST00000580060 1750 ntBASIC4.99□□□□□ -1.61
SLC28A1O00337 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC28A1O00337 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.98□□□□□ -1.61
SLC28A1O00337 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC28A1O00337 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC28A1O00337 RBPJP2-201ENST00000618187 1444 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC28A1O00337 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC28A1O00337 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SLC28A1O00337 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC28A1O00337 RNU4-7P-201ENST00000364758 141 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC28A1O00337 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC28A1O00337 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SLC28A1O00337 RNU1-149P-201ENST00000390870 161 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 RNA5SP339-201ENST00000390987 122 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 AL034403.1-201ENST00000399414 885 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 RPL5P19-201ENST00000404228 893 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC28A1O00337 RN7SKP16-201ENST00000410180 299 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 AC211486.3-201ENST00000412694 621 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC28A1O00337 FAM96AP1-201ENST00000430879 482 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.98□□□□□ -1.61
SLC28A1O00337 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC28A1O00337 AC012512.1-201ENST00000446594 718 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SLC28A1O00337 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.98□□□□□ -1.61
SLC28A1O00337 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC28A1O00337 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SLC28A1O00337 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.98□□□□□ -1.61
SLC28A1O00337 AC074029.2-201ENST00000551045 634 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC28A1O00337 AC011840.5-201ENST00000582125 771 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.98□□□□□ -1.61
SLC28A1O00337 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.98□□□□□ -1.61
SLC28A1O00337 SUGT1P3-202ENST00000604259 383 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 AC073111.2-201ENST00000605657 1075 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 AC104820.1-201ENST00000624183 307 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC28A1O00337 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC28A1O00337 AC133552.1-201ENST00000569988 4007 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC28A1O00337 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.98□□□□□ -1.61
SLC28A1O00337 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.98□□□□□ -1.61
SLC28A1O00337 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.98□□□□□ -1.61
SLC28A1O00337 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms