Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
NPIPA3F8WFD2 AC007938.2-201ENST00000604666 2634 ntBASIC4.9□□□□□ -1.62
NPIPA3F8WFD2 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.9□□□□□ -1.62
NPIPA3F8WFD2 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NPIPA3F8WFD2 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
NPIPA3F8WFD2 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 RNU1-43P-201ENST00000365052 165 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 RNU1-149P-201ENST00000390870 161 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 RNA5SP339-201ENST00000390987 122 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 RN7SKP213-201ENST00000410746 298 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 USP9YP19-201ENST00000412165 485 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 RPL23AP27-201ENST00000415161 451 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AC108075.1-201ENST00000424692 529 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 MTATP6P11-201ENST00000428071 670 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 RPL5P2-201ENST00000429598 854 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AC093716.1-201ENST00000435923 377 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AL359265.1-201ENST00000440296 795 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 RPS11P7-201ENST00000442125 465 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AC245517.2-201ENST00000442890 346 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AC023271.1-201ENST00000445936 1090 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 MTND5P8-201ENST00000449817 1083 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AZGP1P2-201ENST00000454506 345 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 RPL5P13-201ENST00000462840 709 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 RPSAP50-201ENST00000481955 852 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AC004453.1-201ENST00000487895 408 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 RN7SL808P-201ENST00000496066 299 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 HMGB1P44-201ENST00000508597 572 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 RNU6-941P-201ENST00000516346 108 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 MIR3691-201ENST00000578066 90 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AC006272.2-201ENST00000594725 163 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AC040174.2-201ENST00000602701 465 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AL445222.1-201ENST00000607259 628 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AL355802.4-201ENST00000607635 548 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AC118658.2-201ENST00000618697 459 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AC020923.1-201ENST00000624021 917 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 AL355834.1-201ENST00000556602 3965 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 ZNF733P-202ENST00000444809 1573 ntBASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPIPA3F8WFD2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC053481.2-202ENST00000582394 1500 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AL353796.1-201ENST00000561542 3241 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 RNA5SP453-201ENST00000362503 119 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 RNU1-146P-201ENST00000364015 165 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 SNORA70.6-201ENST00000383934 134 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AL645927.1-201ENST00000396783 406 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AL133482.1-201ENST00000415988 498 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AL158827.1-201ENST00000416300 391 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 BTF3P9-201ENST00000418784 283 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 HMGB3P10-201ENST00000434734 572 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 MTCYBP29-201ENST00000436327 1006 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AL353898.1-201ENST00000444055 238 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.89□□□□□ -1.63
NPIPA3F8WFD2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms