Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC090666.1-201ENST00000578241 445 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC011626.1-201ENST00000604710 562 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC063952.1-203ENST00000634410 658 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 AC008432.1-201ENST00000615912 1320 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 Z95114.1-201ENST00000624264 14574 ntBASIC5.43□□□□□ -1.54
TCRBV7S3A2A0A539 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC116158.1-201ENST00000560231 2129 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC012078.1-201ENST00000405035 1646 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 RNU1-19P-201ENST00000363306 165 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 RNA5SP234-201ENST00000363916 119 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 RNU4-2-201ENST00000365668 141 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 HMGB3P19-201ENST00000403971 560 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AL158825.1-201ENST00000414735 521 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 PRUNEP1-201ENST00000425846 705 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 MTCYBP29-201ENST00000436327 1006 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 MTCYBP21-201ENST00000443300 1113 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AL353898.1-201ENST00000444055 238 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC073109.1-201ENST00000445066 978 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 RPL36AP39-201ENST00000445859 318 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AL672138.1-201ENST00000450604 1015 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 OFD1P3Y-201ENST00000453312 783 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 RANP1-206ENST00000455094 651 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC245028.2-201ENST00000458673 253 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC115223.1-201ENST00000466377 870 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 RN7SL649P-201ENST00000496974 275 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 OR5H3P-201ENST00000502817 919 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 NIFKP7-201ENST00000503365 834 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 HMGB1P44-201ENST00000508597 572 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 SCARNA16.4-201ENST00000516956 187 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC010476.1-201ENST00000519111 851 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC100784.1-201ENST00000522790 310 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC010547.6-201ENST00000571789 193 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC008507.2-201ENST00000588402 1176 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC000068.2-201ENST00000608816 460 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC109583.2-201ENST00000617367 129 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC078880.5-201ENST00000617845 421 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC006927.4-201ENST00000639187 543 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC013437.2-201ENST00000639587 677 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 AC130360.2-201ENST00000533477 1556 ntBASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV7S3A2A0A539 HSPD1P14-201ENST00000432666 1618 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 SMG1P7-201ENST00000565246 2704 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC004817.4-201ENST00000602396 3625 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 MIR133B-201ENST00000362210 119 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 RPL22P22-201ENST00000395439 379 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC099535.1-201ENST00000408928 371 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 RN7SKP16-201ENST00000410180 299 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 MTCO2P8-201ENST00000412213 658 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 MTCYBP7-201ENST00000419540 1134 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 RPL24P2-201ENST00000421023 475 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC006994.1-201ENST00000438212 839 ntBASIC5.41□□□□□ -1.54
TCRBV7S3A2A0A539 AC064862.4-201ENST00000442180 334 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms