Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MIR8069-1-201ENST00000616627 86 ntBASIC4.43□□□□□ -1.7
TRAV27A0A087WT01 MIR8069-2-201ENST00000621412 86 ntBASIC4.43□□□□□ -1.7
TRAV27A0A087WT01 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.43□□□□□ -1.7
TRAV27A0A087WT01 AC073869.7-201ENST00000640874 297 ntBASIC4.43□□□□□ -1.7
TRAV27A0A087WT01 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRAV27A0A087WT01 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.43□□□□□ -1.7
TRAV27A0A087WT01 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
TRAV27A0A087WT01 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
TRAV27A0A087WT01 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
TRAV27A0A087WT01 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 PABPC1P6-201ENST00000445594 1829 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 PROS2P-201ENST00000474651 1951 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 AC005522.1-201ENST00000395416 346 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 AL391361.1-201ENST00000405580 489 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 U3.36-201ENST00000408418 213 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 TBCAP2-201ENST00000416175 326 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 BMS1P13-201ENST00000417301 885 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 RPL34P6-201ENST00000432390 345 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 AL137845.2-201ENST00000444292 988 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 AC000111.2-201ENST00000448200 210 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 AL591473.1-201ENST00000464297 313 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 RN7SL222P-201ENST00000476452 299 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 RN7SL244P-201ENST00000493405 297 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 HIGD1AP14-201ENST00000507617 282 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 OR8G7P-201ENST00000616658 848 ntBASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.42□□□□□ -1.7
TRAV27A0A087WT01 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AL034370.1-201ENST00000397254 1590 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 CASC19-281ENST00000642118 1554 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AC027279.1-201ENST00000568885 4284 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 UBBP2-201ENST00000376781 231 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AL592291.1-201ENST00000403830 352 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 MIR1271-201ENST00000408537 86 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 E2F6P2-201ENST00000420708 748 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AL031584.1-201ENST00000447169 754 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AC079841.1-201ENST00000481228 950 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 SNRPCP2-201ENST00000504370 475 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AC106872.4-201ENST00000510050 523 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AC138938.1-201ENST00000515431 782 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 MIR4691-201ENST00000583764 85 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AC011447.4-201ENST00000587562 111 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AL022401.1-201ENST00000619498 108 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AL672167.1-203ENST00000641299 2975 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 AC008758.3-201ENST00000507003 1829 ntBASIC4.41□□□□□ -1.7
TRAV27A0A087WT01 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms