Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 AFG3L1P-217ENST00000557444 2447 ntBASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 FAM197Y1-201ENST00000421178 764 ntBASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDHGA3Q9Y5H0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 RCN1P1-201ENST00000400413 996 ntBASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA3Q9Y5H0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 AC073314.1-201ENST00000568729 2216 ntBASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHGA3Q9Y5H0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 AP002982.1-201ENST00000492365 877 ntBASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 NUDT16P1-203ENST00000513809 620 ntBASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 PTBP1P-201ENST00000554374 1601 ntBASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA3Q9Y5H0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 AC121338.2-201ENST00000622535 1744 ntBASIC18.94■□□□□ 0.62
PCDHGA3Q9Y5H0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms