Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 AC018553.1-201ENST00000616682 1458 ntBASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHB1Q9Y5F3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 AL135905.2-201ENST00000584934 1404 ntBASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 AL355075.4-201ENST00000554988 638 ntBASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHB1Q9Y5F3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 PRKY-204ENST00000533551 1019 ntBASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHB1Q9Y5F3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms