Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 AC092329.2-201ENST00000598402 547 ntBASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.74■■□□□ 1.39
ZC3H4Q9UPT8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ZC3H4Q9UPT8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 AP003041.3-201ENST00000527151 707 ntBASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZC3H4Q9UPT8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 FGF14-AS2-201ENST00000606448 1074 ntBASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZC3H4Q9UPT8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
ZC3H4Q9UPT8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
ZC3H4Q9UPT8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.7■■□□□ 1.38
ZC3H4Q9UPT8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZC3H4Q9UPT8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.69■■□□□ 1.38
ZC3H4Q9UPT8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
ZC3H4Q9UPT8 SPDYE13P-201ENST00000445314 798 ntBASIC23.69■■□□□ 1.38
ZC3H4Q9UPT8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC23.69■■□□□ 1.38
ZC3H4Q9UPT8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.69■■□□□ 1.38
ZC3H4Q9UPT8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.69■■□□□ 1.38
ZC3H4Q9UPT8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.69■■□□□ 1.38
ZC3H4Q9UPT8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZC3H4Q9UPT8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZC3H4Q9UPT8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
ZC3H4Q9UPT8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.69■■□□□ 1.38
ZC3H4Q9UPT8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.69■■□□□ 1.38
ZC3H4Q9UPT8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC23.68■■□□□ 1.38
ZC3H4Q9UPT8 UNC93B7-201ENST00000509439 705 ntBASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms