Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 KRASP1-201ENST00000407852 552 ntBASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 AC239809.2-201ENST00000415381 517 ntBASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 C1QBPP2-201ENST00000528754 825 ntBASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 AL359736.2-201ENST00000621992 437 ntBASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CUEDC1Q9NWM3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 REXO1L12P-201ENST00000622156 912 ntBASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 AL158211.5-201ENST00000623583 2518 ntBASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.9■□□□□ 0.62
CUEDC1Q9NWM3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CUEDC1Q9NWM3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CUEDC1Q9NWM3 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 AC124016.1-201ENST00000609552 612 ntBASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 NBPF21P-201ENST00000425093 1451 ntBASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CUEDC1Q9NWM3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 AC211429.1-201ENST00000415277 523 ntBASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.88■□□□□ 0.61
CUEDC1Q9NWM3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms