Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.15■□□□□ 0.5
POLE3Q9NRF9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.15■□□□□ 0.5
POLE3Q9NRF9 AC098934.4-201ENST00000564127 592 ntBASIC18.15■□□□□ 0.5
POLE3Q9NRF9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLE3Q9NRF9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
POLE3Q9NRF9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
POLE3Q9NRF9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
POLE3Q9NRF9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLE3Q9NRF9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLE3Q9NRF9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLE3Q9NRF9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
POLE3Q9NRF9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLE3Q9NRF9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLE3Q9NRF9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLE3Q9NRF9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLE3Q9NRF9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
POLE3Q9NRF9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.14■□□□□ 0.49
POLE3Q9NRF9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLE3Q9NRF9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.13■□□□□ 0.49
POLE3Q9NRF9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLE3Q9NRF9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 AC120498.8-201ENST00000614275 531 ntBASIC18.12■□□□□ 0.49
POLE3Q9NRF9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLE3Q9NRF9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 AL121829.2-201ENST00000620908 328 ntBASIC18.11■□□□□ 0.49
POLE3Q9NRF9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLE3Q9NRF9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms