Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.41■□□□□ 0.7
SSU72Q9NP77 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.41■□□□□ 0.7
SSU72Q9NP77 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSU72Q9NP77 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSU72Q9NP77 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSU72Q9NP77 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SSU72Q9NP77 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSU72Q9NP77 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SSU72Q9NP77 AC018553.1-201ENST00000616682 1458 ntBASIC19.41■□□□□ 0.7
SSU72Q9NP77 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SSU72Q9NP77 AC116351.2-201ENST00000606540 1585 ntBASIC19.4■□□□□ 0.7
SSU72Q9NP77 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.4■□□□□ 0.7
SSU72Q9NP77 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSU72Q9NP77 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SSU72Q9NP77 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSU72Q9NP77 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.4■□□□□ 0.7
SSU72Q9NP77 ZNF815P-204ENST00000434898 1737 ntBASIC19.4■□□□□ 0.7
SSU72Q9NP77 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSU72Q9NP77 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SSU72Q9NP77 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.4■□□□□ 0.7
SSU72Q9NP77 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.4■□□□□ 0.7
SSU72Q9NP77 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSU72Q9NP77 BICD1-207ENST00000551848 1962 ntBASIC19.4■□□□□ 0.7
SSU72Q9NP77 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSU72Q9NP77 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.4■□□□□ 0.7
SSU72Q9NP77 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SSU72Q9NP77 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSU72Q9NP77 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
SSU72Q9NP77 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSU72Q9NP77 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
SSU72Q9NP77 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSU72Q9NP77 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSU72Q9NP77 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.4■□□□□ 0.7
SSU72Q9NP77 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
SSU72Q9NP77 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSU72Q9NP77 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSU72Q9NP77 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSU72Q9NP77 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
SSU72Q9NP77 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SSU72Q9NP77 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SSU72Q9NP77 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.39■□□□□ 0.69
SSU72Q9NP77 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.39■□□□□ 0.69
SSU72Q9NP77 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SSU72Q9NP77 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SSU72Q9NP77 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SSU72Q9NP77 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.39■□□□□ 0.69
SSU72Q9NP77 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SSU72Q9NP77 AC120498.9-201ENST00000339021 3867 ntBASIC19.39■□□□□ 0.69
SSU72Q9NP77 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SSU72Q9NP77 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSU72Q9NP77 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SSU72Q9NP77 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSU72Q9NP77 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSU72Q9NP77 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSU72Q9NP77 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.38■□□□□ 0.69
SSU72Q9NP77 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.38■□□□□ 0.69
SSU72Q9NP77 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSU72Q9NP77 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSU72Q9NP77 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.38■□□□□ 0.69
SSU72Q9NP77 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SSU72Q9NP77 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.38■□□□□ 0.69
SSU72Q9NP77 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSU72Q9NP77 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSU72Q9NP77 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.38■□□□□ 0.69
SSU72Q9NP77 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSU72Q9NP77 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.38■□□□□ 0.69
SSU72Q9NP77 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSU72Q9NP77 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSU72Q9NP77 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSU72Q9NP77 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.38■□□□□ 0.69
SSU72Q9NP77 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.38■□□□□ 0.69
SSU72Q9NP77 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.38■□□□□ 0.69
SSU72Q9NP77 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.38■□□□□ 0.69
SSU72Q9NP77 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSU72Q9NP77 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSU72Q9NP77 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSU72Q9NP77 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SSU72Q9NP77 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSU72Q9NP77 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.37■□□□□ 0.69
SSU72Q9NP77 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSU72Q9NP77 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.37■□□□□ 0.69
SSU72Q9NP77 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.37■□□□□ 0.69
SSU72Q9NP77 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.37■□□□□ 0.69
SSU72Q9NP77 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms