Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 AL158211.5-201ENST00000623583 2518 ntBASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.84■□□□□ 0.77
POLR1EQ9GZS1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
POLR1EQ9GZS1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.83■□□□□ 0.77
POLR1EQ9GZS1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
POLR1EQ9GZS1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
POLR1EQ9GZS1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.83■□□□□ 0.77
POLR1EQ9GZS1 RPPH1-201ENST00000516869 333 ntBASIC19.83■□□□□ 0.77
POLR1EQ9GZS1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.83■□□□□ 0.77
POLR1EQ9GZS1 AC110285.5-201ENST00000611501 352 ntBASIC19.83■□□□□ 0.77
POLR1EQ9GZS1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.83■□□□□ 0.77
POLR1EQ9GZS1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
POLR1EQ9GZS1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR1EQ9GZS1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.83■□□□□ 0.76
POLR1EQ9GZS1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.83■□□□□ 0.76
POLR1EQ9GZS1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
POLR1EQ9GZS1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
POLR1EQ9GZS1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR1EQ9GZS1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR1EQ9GZS1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.83■□□□□ 0.76
POLR1EQ9GZS1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
POLR1EQ9GZS1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR1EQ9GZS1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.83■□□□□ 0.76
POLR1EQ9GZS1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 KRT8P8-201ENST00000434750 1448 ntBASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.82■□□□□ 0.76
POLR1EQ9GZS1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 KRT16P5-201ENST00000455284 522 ntBASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
POLR1EQ9GZS1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 AL359736.2-201ENST00000621992 437 ntBASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 FAM197Y4-202ENST00000622692 608 ntBASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 AIRN-201ENST00000601203 4374 ntBASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
POLR1EQ9GZS1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms