Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL13Q99616 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.38■□□□□ 0.21
CCL13Q99616 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL13Q99616 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CCL13Q99616 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL13Q99616 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL13Q99616 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL13Q99616 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.38■□□□□ 0.21
CCL13Q99616 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL13Q99616 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL13Q99616 YBX1P10-201ENST00000444752 975 ntBASIC16.38■□□□□ 0.21
CCL13Q99616 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL13Q99616 AC098590.1-201ENST00000468126 897 ntBASIC16.38■□□□□ 0.21
CCL13Q99616 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.38■□□□□ 0.21
CCL13Q99616 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CCL13Q99616 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL13Q99616 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCL13Q99616 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.38■□□□□ 0.21
CCL13Q99616 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCL13Q99616 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL13Q99616 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL13Q99616 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CCL13Q99616 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL13Q99616 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL13Q99616 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL13Q99616 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL13Q99616 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCL13Q99616 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCL13Q99616 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.38■□□□□ 0.21
CCL13Q99616 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL13Q99616 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CCL13Q99616 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL13Q99616 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL13Q99616 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL13Q99616 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CCL13Q99616 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CCL13Q99616 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL13Q99616 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL13Q99616 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL13Q99616 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.37■□□□□ 0.21
CCL13Q99616 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CCL13Q99616 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL13Q99616 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.37■□□□□ 0.21
CCL13Q99616 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.37■□□□□ 0.21
CCL13Q99616 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL13Q99616 AC004264.1-201ENST00000608354 794 ntBASIC16.37■□□□□ 0.21
CCL13Q99616 AC110285.5-201ENST00000611501 352 ntBASIC16.37■□□□□ 0.21
CCL13Q99616 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL13Q99616 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
CCL13Q99616 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.37■□□□□ 0.21
CCL13Q99616 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CCL13Q99616 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL13Q99616 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL13Q99616 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL13Q99616 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL13Q99616 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.36■□□□□ 0.21
CCL13Q99616 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCL13Q99616 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCL13Q99616 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL13Q99616 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCL13Q99616 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL13Q99616 AC125437.2-201ENST00000625180 2167 ntBASIC16.36■□□□□ 0.21
CCL13Q99616 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL13Q99616 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CCL13Q99616 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCL13Q99616 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.36■□□□□ 0.21
CCL13Q99616 AC133681.1-201ENST00000465482 601 ntBASIC16.36■□□□□ 0.21
CCL13Q99616 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.36■□□□□ 0.21
CCL13Q99616 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CCL13Q99616 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.36■□□□□ 0.21
CCL13Q99616 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.36■□□□□ 0.21
CCL13Q99616 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.36■□□□□ 0.21
CCL13Q99616 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.36■□□□□ 0.21
CCL13Q99616 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.36■□□□□ 0.21
CCL13Q99616 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CCL13Q99616 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL13Q99616 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.36■□□□□ 0.21
CCL13Q99616 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL13Q99616 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL13Q99616 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCL13Q99616 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL13Q99616 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL13Q99616 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL13Q99616 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL13Q99616 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCL13Q99616 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL13Q99616 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.35■□□□□ 0.21
CCL13Q99616 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL13Q99616 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL13Q99616 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL13Q99616 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL13Q99616 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.35■□□□□ 0.21
CCL13Q99616 TUBB8P6-201ENST00000436895 1288 ntBASIC16.35■□□□□ 0.21
CCL13Q99616 GCSHP5-201ENST00000443090 522 ntBASIC16.35■□□□□ 0.21
CCL13Q99616 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL13Q99616 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.35■□□□□ 0.21
CCL13Q99616 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL13Q99616 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL13Q99616 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.35■□□□□ 0.21
CCL13Q99616 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms