Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 FAM8A6P-201ENST00000407496 1135 ntBASIC20.81■□□□□ 0.92
ZNF558Q96NG5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 COX11P1-201ENST00000489116 835 ntBASIC20.81■□□□□ 0.92
ZNF558Q96NG5 YBX1P2-201ENST00000489612 999 ntBASIC20.81■□□□□ 0.92
ZNF558Q96NG5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 AC091076.1-201ENST00000610741 619 ntBASIC20.81■□□□□ 0.92
ZNF558Q96NG5 AL023803.3-201ENST00000615559 522 ntBASIC20.81■□□□□ 0.92
ZNF558Q96NG5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF558Q96NG5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.8■□□□□ 0.92
ZNF558Q96NG5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 AL358472.4-201ENST00000633140 710 ntBASIC20.8■□□□□ 0.92
ZNF558Q96NG5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF558Q96NG5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 TSPY5P-201ENST00000426936 936 ntBASIC20.79■□□□□ 0.92
ZNF558Q96NG5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 AC092647.4-201ENST00000457211 535 ntBASIC20.79■□□□□ 0.92
ZNF558Q96NG5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 AC141257.4-201ENST00000634557 245 ntBASIC20.79■□□□□ 0.92
ZNF558Q96NG5 AC136944.6-201ENST00000634818 245 ntBASIC20.79■□□□□ 0.92
ZNF558Q96NG5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
ZNF558Q96NG5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 UPK3BP1-201ENST00000428678 509 ntBASIC20.78■□□□□ 0.92
ZNF558Q96NG5 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.78■□□□□ 0.92
ZNF558Q96NG5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 AL353719.1-201ENST00000566847 864 ntBASIC20.78■□□□□ 0.92
ZNF558Q96NG5 AL512604.3-201ENST00000569583 964 ntBASIC20.78■□□□□ 0.92
ZNF558Q96NG5 MYC-208ENST00000641036 567 ntBASIC20.78■□□□□ 0.92
ZNF558Q96NG5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.78■□□□□ 0.92
ZNF558Q96NG5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF558Q96NG5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ZNF558Q96NG5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.77■□□□□ 0.91
ZNF558Q96NG5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF558Q96NG5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF558Q96NG5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.77■□□□□ 0.91
ZNF558Q96NG5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF558Q96NG5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF558Q96NG5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms