Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 CKBP1-201ENST00000565489 1086 ntBASIC23.24■■□□□ 1.31
TRPM4Q8TD43 AL160286.2-201ENST00000567150 934 ntBASIC23.24■■□□□ 1.31
TRPM4Q8TD43 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRPM4Q8TD43 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 SPDYE13P-201ENST00000445314 798 ntBASIC23.23■■□□□ 1.31
TRPM4Q8TD43 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 LY6E-213ENST00000522528 606 ntTSL 3 BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 NPAP1P7-201ENST00000613027 823 ntBASIC23.23■■□□□ 1.31
TRPM4Q8TD43 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
TRPM4Q8TD43 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 AF106564.1-201ENST00000607058 2553 ntBASIC23.22■■□□□ 1.31
TRPM4Q8TD43 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 SPDYE15P-201ENST00000424157 909 ntBASIC23.22■■□□□ 1.31
TRPM4Q8TD43 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 GCSHP2-201ENST00000560971 527 ntBASIC23.22■■□□□ 1.31
TRPM4Q8TD43 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 LINC01311-201ENST00000565162 1445 ntBASIC23.22■■□□□ 1.31
TRPM4Q8TD43 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.22■■□□□ 1.31
TRPM4Q8TD43 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TRPM4Q8TD43 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRPM4Q8TD43 PVRIG2P-201ENST00000435460 978 ntBASIC23.21■■□□□ 1.31
TRPM4Q8TD43 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC23.21■■□□□ 1.31
TRPM4Q8TD43 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.21■■□□□ 1.31
TRPM4Q8TD43 AC092119.3-201ENST00000612618 583 ntBASIC23.21■■□□□ 1.31
TRPM4Q8TD43 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.21■■□□□ 1.31
TRPM4Q8TD43 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.21■■□□□ 1.31
TRPM4Q8TD43 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRPM4Q8TD43 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TRPM4Q8TD43 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.21■■□□□ 1.31
TRPM4Q8TD43 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRPM4Q8TD43 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 KRT8P41-201ENST00000533985 1514 ntBASIC23.2■■□□□ 1.3
TRPM4Q8TD43 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 STARP1-201ENST00000397973 869 ntBASIC23.2■■□□□ 1.3
TRPM4Q8TD43 AP000347.1-202ENST00000435868 847 ntBASIC23.2■■□□□ 1.3
TRPM4Q8TD43 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRPM4Q8TD43 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms