Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.36■□□□□ 0.21
VPS13CQ709C8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.36■□□□□ 0.21
VPS13CQ709C8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VPS13CQ709C8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.36■□□□□ 0.21
VPS13CQ709C8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VPS13CQ709C8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS13CQ709C8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS13CQ709C8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 KRT17P6-201ENST00000453795 1220 ntBASIC16.35■□□□□ 0.21
VPS13CQ709C8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
VPS13CQ709C8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.35■□□□□ 0.21
VPS13CQ709C8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS13CQ709C8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS13CQ709C8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
VPS13CQ709C8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 SPDYE13P-201ENST00000445314 798 ntBASIC16.35■□□□□ 0.21
VPS13CQ709C8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS13CQ709C8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS13CQ709C8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13CQ709C8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13CQ709C8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13CQ709C8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 AC244015.2-201ENST00000616358 1861 ntBASIC16.34■□□□□ 0.21
VPS13CQ709C8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13CQ709C8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 AL441883.1-201ENST00000566170 1045 ntBASIC16.34■□□□□ 0.21
VPS13CQ709C8 AL512604.3-201ENST00000569583 964 ntBASIC16.34■□□□□ 0.21
VPS13CQ709C8 CR769767.2-201ENST00000622735 460 ntBASIC16.34■□□□□ 0.21
VPS13CQ709C8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13CQ709C8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13CQ709C8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13CQ709C8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13CQ709C8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 AC007375.3-201ENST00000600936 2314 ntBASIC16.34■□□□□ 0.21
VPS13CQ709C8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13CQ709C8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.34■□□□□ 0.21
VPS13CQ709C8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13CQ709C8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13CQ709C8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS13CQ709C8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.33■□□□□ 0.21
VPS13CQ709C8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS13CQ709C8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13CQ709C8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS13CQ709C8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13CQ709C8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.33■□□□□ 0.2
VPS13CQ709C8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13CQ709C8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13CQ709C8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13CQ709C8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13CQ709C8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13CQ709C8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
VPS13CQ709C8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13CQ709C8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS13CQ709C8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.33■□□□□ 0.2
VPS13CQ709C8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.33■□□□□ 0.2
VPS13CQ709C8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13CQ709C8 TSPY17P-201ENST00000450329 467 ntBASIC16.33■□□□□ 0.2
VPS13CQ709C8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13CQ709C8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.33■□□□□ 0.2
VPS13CQ709C8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13CQ709C8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.33■□□□□ 0.2
VPS13CQ709C8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
VPS13CQ709C8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13CQ709C8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
VPS13CQ709C8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
VPS13CQ709C8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS13CQ709C8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS13CQ709C8 DPP3P2-201ENST00000416030 1696 ntBASIC16.33■□□□□ 0.2
VPS13CQ709C8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
VPS13CQ709C8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VPS13CQ709C8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VPS13CQ709C8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.32■□□□□ 0.2
VPS13CQ709C8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VPS13CQ709C8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
VPS13CQ709C8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms