Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.73■□□□□ 0.43
SUMO3P55854 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.73■□□□□ 0.43
SUMO3P55854 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.73■□□□□ 0.43
SUMO3P55854 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SUMO3P55854 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SUMO3P55854 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SUMO3P55854 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SUMO3P55854 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.72■□□□□ 0.43
SUMO3P55854 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SUMO3P55854 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SUMO3P55854 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SUMO3P55854 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.72■□□□□ 0.43
SUMO3P55854 PRORSD1P-201ENST00000295112 541 ntBASIC17.72■□□□□ 0.43
SUMO3P55854 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.72■□□□□ 0.43
SUMO3P55854 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SUMO3P55854 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.72■□□□□ 0.43
SUMO3P55854 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.72■□□□□ 0.43
SUMO3P55854 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.72■□□□□ 0.43
SUMO3P55854 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SUMO3P55854 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.72■□□□□ 0.43
SUMO3P55854 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.72■□□□□ 0.43
SUMO3P55854 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.72■□□□□ 0.43
SUMO3P55854 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.72■□□□□ 0.43
SUMO3P55854 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SUMO3P55854 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SUMO3P55854 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SUMO3P55854 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.72■□□□□ 0.43
SUMO3P55854 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SUMO3P55854 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SUMO3P55854 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SUMO3P55854 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SUMO3P55854 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SUMO3P55854 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.71■□□□□ 0.43
SUMO3P55854 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.71■□□□□ 0.43
SUMO3P55854 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SUMO3P55854 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SUMO3P55854 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SUMO3P55854 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.71■□□□□ 0.43
SUMO3P55854 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SUMO3P55854 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SUMO3P55854 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.71■□□□□ 0.43
SUMO3P55854 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SUMO3P55854 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.71■□□□□ 0.43
SUMO3P55854 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SUMO3P55854 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SUMO3P55854 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.71■□□□□ 0.43
SUMO3P55854 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.71■□□□□ 0.43
SUMO3P55854 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SUMO3P55854 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SUMO3P55854 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SUMO3P55854 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.71■□□□□ 0.43
SUMO3P55854 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SUMO3P55854 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SUMO3P55854 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
SUMO3P55854 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SUMO3P55854 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SUMO3P55854 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.71■□□□□ 0.42
SUMO3P55854 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SUMO3P55854 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SUMO3P55854 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.7■□□□□ 0.42
SUMO3P55854 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SUMO3P55854 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SUMO3P55854 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.7■□□□□ 0.42
SUMO3P55854 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SUMO3P55854 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SUMO3P55854 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SUMO3P55854 AL353807.1-201ENST00000427475 662 ntBASIC17.7■□□□□ 0.42
SUMO3P55854 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SUMO3P55854 AL359736.2-201ENST00000621992 437 ntBASIC17.7■□□□□ 0.42
SUMO3P55854 FAM197Y4-202ENST00000622692 608 ntBASIC17.7■□□□□ 0.42
SUMO3P55854 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SUMO3P55854 SLC25A24-204ENST00000569674 2357 ntBASIC17.7■□□□□ 0.42
SUMO3P55854 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SUMO3P55854 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.7■□□□□ 0.42
SUMO3P55854 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SUMO3P55854 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SUMO3P55854 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SUMO3P55854 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SUMO3P55854 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.7■□□□□ 0.42
SUMO3P55854 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SUMO3P55854 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SUMO3P55854 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.69■□□□□ 0.42
SUMO3P55854 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SUMO3P55854 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SUMO3P55854 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SUMO3P55854 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SUMO3P55854 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SUMO3P55854 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SUMO3P55854 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SUMO3P55854 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.69■□□□□ 0.42
SUMO3P55854 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SUMO3P55854 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SUMO3P55854 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.69■□□□□ 0.42
SUMO3P55854 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.69■□□□□ 0.42
SUMO3P55854 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SUMO3P55854 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SUMO3P55854 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.69■□□□□ 0.42
SUMO3P55854 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SUMO3P55854 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SUMO3P55854 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms