Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.49■□□□□ 0.71
ZNF140P52738 RN7SL471P-201ENST00000580476 299 ntBASIC19.49■□□□□ 0.71
ZNF140P52738 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF140P52738 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF140P52738 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF140P52738 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF140P52738 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNF140P52738 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ZNF140P52738 KRASP1-201ENST00000407852 552 ntBASIC19.48■□□□□ 0.71
ZNF140P52738 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.48■□□□□ 0.71
ZNF140P52738 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
ZNF140P52738 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 AC124016.1-201ENST00000609552 612 ntBASIC19.48■□□□□ 0.71
ZNF140P52738 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ZNF140P52738 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ZNF140P52738 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNF140P52738 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF140P52738 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF140P52738 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF140P52738 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF140P52738 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF140P52738 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF140P52738 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF140P52738 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF140P52738 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF140P52738 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ZNF140P52738 AC007952.6-201ENST00000573168 2673 ntBASIC19.47■□□□□ 0.71
ZNF140P52738 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ZNF140P52738 AC003957.1-201ENST00000625108 2673 ntBASIC19.47■□□□□ 0.71
ZNF140P52738 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF140P52738 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF140P52738 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
ZNF140P52738 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF140P52738 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF140P52738 AC133681.1-201ENST00000465482 601 ntBASIC19.47■□□□□ 0.71
ZNF140P52738 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
ZNF140P52738 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.47■□□□□ 0.71
ZNF140P52738 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ZNF140P52738 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ZNF140P52738 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ZNF140P52738 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF140P52738 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF140P52738 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
ZNF140P52738 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.47■□□□□ 0.71
ZNF140P52738 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
ZNF140P52738 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF140P52738 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNF140P52738 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ZNF140P52738 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
ZNF140P52738 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ZNF140P52738 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF140P52738 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
ZNF140P52738 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF140P52738 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF140P52738 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF140P52738 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF140P52738 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNF140P52738 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF140P52738 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF140P52738 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF140P52738 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF140P52738 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ZNF140P52738 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF140P52738 AC005332.7-201ENST00000614046 2005 ntBASIC19.46■□□□□ 0.71
ZNF140P52738 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.7
ZNF140P52738 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ZNF140P52738 ZNF815P-204ENST00000434898 1737 ntBASIC19.45■□□□□ 0.7
ZNF140P52738 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ZNF140P52738 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.45■□□□□ 0.7
ZNF140P52738 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ZNF140P52738 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF140P52738 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF140P52738 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF140P52738 FAM201B-201ENST00000458407 597 ntBASIC19.45■□□□□ 0.7
ZNF140P52738 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF140P52738 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF140P52738 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.45■□□□□ 0.7
ZNF140P52738 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.45■□□□□ 0.7
ZNF140P52738 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.45■□□□□ 0.7
ZNF140P52738 ITM2C-210ENST00000620962 501 ntBASIC19.45■□□□□ 0.7
ZNF140P52738 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.45■□□□□ 0.7
ZNF140P52738 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF140P52738 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF140P52738 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF140P52738 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms