Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.66■■□□□ 1.06
CDK7P50613 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDK7P50613 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.66■■□□□ 1.06
CDK7P50613 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK7P50613 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CDK7P50613 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.65■■□□□ 1.06
CDK7P50613 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDK7P50613 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDK7P50613 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDK7P50613 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.65■■□□□ 1.06
CDK7P50613 AC092647.4-201ENST00000457211 535 ntBASIC21.65■■□□□ 1.06
CDK7P50613 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDK7P50613 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.65■■□□□ 1.06
CDK7P50613 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
CDK7P50613 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDK7P50613 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.65■■□□□ 1.06
CDK7P50613 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDK7P50613 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CDK7P50613 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDK7P50613 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.64■■□□□ 1.06
CDK7P50613 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDK7P50613 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.64■■□□□ 1.06
CDK7P50613 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDK7P50613 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.64■■□□□ 1.05
CDK7P50613 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK7P50613 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.64■■□□□ 1.05
CDK7P50613 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.64■■□□□ 1.05
CDK7P50613 KRT18P48-201ENST00000434763 852 ntBASIC21.64■■□□□ 1.05
CDK7P50613 TSPY17P-201ENST00000450329 467 ntBASIC21.64■■□□□ 1.05
CDK7P50613 Z85996.1-201ENST00000494644 937 ntBASIC21.64■■□□□ 1.05
CDK7P50613 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.64■■□□□ 1.05
CDK7P50613 AL353719.1-201ENST00000566847 864 ntBASIC21.64■■□□□ 1.05
CDK7P50613 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.64■■□□□ 1.05
CDK7P50613 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.64■■□□□ 1.05
CDK7P50613 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK7P50613 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CDK7P50613 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK7P50613 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CDK7P50613 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CDK7P50613 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.64■■□□□ 1.05
CDK7P50613 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.63■■□□□ 1.05
CDK7P50613 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK7P50613 PHGDH-210ENST00000641115 1638 ntBASIC21.63■■□□□ 1.05
CDK7P50613 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK7P50613 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK7P50613 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK7P50613 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CDK7P50613 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDK7P50613 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.63■■□□□ 1.05
CDK7P50613 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.63■■□□□ 1.05
CDK7P50613 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.63■■□□□ 1.05
CDK7P50613 AL031432.5-201ENST00000641059 760 ntBASIC21.63■■□□□ 1.05
CDK7P50613 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK7P50613 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK7P50613 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK7P50613 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CDK7P50613 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.62■■□□□ 1.05
CDK7P50613 FP700111.2-201ENST00000619190 1892 ntBASIC21.62■■□□□ 1.05
CDK7P50613 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDK7P50613 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDK7P50613 FEM1AP4-201ENST00000443167 1987 ntBASIC21.62■■□□□ 1.05
CDK7P50613 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDK7P50613 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDK7P50613 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.62■■□□□ 1.05
CDK7P50613 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.62■■□□□ 1.05
CDK7P50613 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.62■■□□□ 1.05
CDK7P50613 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.62■■□□□ 1.05
CDK7P50613 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.62■■□□□ 1.05
CDK7P50613 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
CDK7P50613 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDK7P50613 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDK7P50613 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.62■■□□□ 1.05
CDK7P50613 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK7P50613 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.61■■□□□ 1.05
CDK7P50613 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
CDK7P50613 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.61■■□□□ 1.05
CDK7P50613 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDK7P50613 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK7P50613 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CDK7P50613 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDK7P50613 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK7P50613 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.61■■□□□ 1.05
CDK7P50613 HOMER2P1-201ENST00000455653 964 ntBASIC21.61■■□□□ 1.05
CDK7P50613 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.61■■□□□ 1.05
CDK7P50613 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.61■■□□□ 1.05
CDK7P50613 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.61■■□□□ 1.05
CDK7P50613 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CDK7P50613 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.61■■□□□ 1.05
CDK7P50613 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
CDK7P50613 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDK7P50613 AC026310.3-201ENST00000625186 2373 ntBASIC21.61■■□□□ 1.05
CDK7P50613 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK7P50613 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK7P50613 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK7P50613 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK7P50613 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDK7P50613 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CDK7P50613 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK7P50613 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
CDK7P50613 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms