Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.72■■□□□ 1.07
CPT1AP50416 AC139887.4-201ENST00000607877 719 ntBASIC21.72■■□□□ 1.07
CPT1AP50416 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPT1AP50416 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CPT1AP50416 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPT1AP50416 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.72■■□□□ 1.07
CPT1AP50416 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPT1AP50416 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPT1AP50416 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPT1AP50416 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CPT1AP50416 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.71■■□□□ 1.07
CPT1AP50416 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CPT1AP50416 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.71■■□□□ 1.07
CPT1AP50416 FAM8A6P-201ENST00000407496 1135 ntBASIC21.71■■□□□ 1.07
CPT1AP50416 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.71■■□□□ 1.07
CPT1AP50416 AL512604.3-201ENST00000569583 964 ntBASIC21.71■■□□□ 1.07
CPT1AP50416 AL023803.3-201ENST00000615559 522 ntBASIC21.71■■□□□ 1.07
CPT1AP50416 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPT1AP50416 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CPT1AP50416 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.71■■□□□ 1.07
CPT1AP50416 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.71■■□□□ 1.07
CPT1AP50416 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CPT1AP50416 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CPT1AP50416 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.71■■□□□ 1.07
CPT1AP50416 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CPT1AP50416 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
CPT1AP50416 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.7■■□□□ 1.06
CPT1AP50416 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPT1AP50416 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPT1AP50416 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPT1AP50416 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.7■■□□□ 1.06
CPT1AP50416 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.7■■□□□ 1.06
CPT1AP50416 COX11P1-201ENST00000489116 835 ntBASIC21.7■■□□□ 1.06
CPT1AP50416 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.7■■□□□ 1.06
CPT1AP50416 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.7■■□□□ 1.06
CPT1AP50416 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.7■■□□□ 1.06
CPT1AP50416 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPT1AP50416 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPT1AP50416 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CPT1AP50416 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPT1AP50416 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CPT1AP50416 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPT1AP50416 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPT1AP50416 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPT1AP50416 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPT1AP50416 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CPT1AP50416 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPT1AP50416 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.69■■□□□ 1.06
CPT1AP50416 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CPT1AP50416 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.69■■□□□ 1.06
CPT1AP50416 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPT1AP50416 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPT1AP50416 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.69■■□□□ 1.06
CPT1AP50416 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPT1AP50416 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.69■■□□□ 1.06
CPT1AP50416 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPT1AP50416 CA15P1-201ENST00000481698 905 ntBASIC21.69■■□□□ 1.06
CPT1AP50416 YBX1P2-201ENST00000489612 999 ntBASIC21.69■■□□□ 1.06
CPT1AP50416 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.69■■□□□ 1.06
CPT1AP50416 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CPT1AP50416 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPT1AP50416 AL353719.1-201ENST00000566847 864 ntBASIC21.69■■□□□ 1.06
CPT1AP50416 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.69■■□□□ 1.06
CPT1AP50416 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.69■■□□□ 1.06
CPT1AP50416 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPT1AP50416 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CPT1AP50416 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CPT1AP50416 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CPT1AP50416 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPT1AP50416 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPT1AP50416 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPT1AP50416 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CPT1AP50416 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.69■■□□□ 1.06
CPT1AP50416 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPT1AP50416 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPT1AP50416 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPT1AP50416 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPT1AP50416 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPT1AP50416 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPT1AP50416 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPT1AP50416 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.68■■□□□ 1.06
CPT1AP50416 AC091076.1-201ENST00000610741 619 ntBASIC21.68■■□□□ 1.06
CPT1AP50416 AC141257.4-201ENST00000634557 245 ntBASIC21.68■■□□□ 1.06
CPT1AP50416 AC136944.6-201ENST00000634818 245 ntBASIC21.68■■□□□ 1.06
CPT1AP50416 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.68■■□□□ 1.06
CPT1AP50416 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CPT1AP50416 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.68■■□□□ 1.06
CPT1AP50416 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.68■■□□□ 1.06
CPT1AP50416 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.68■■□□□ 1.06
CPT1AP50416 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPT1AP50416 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPT1AP50416 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.68■■□□□ 1.06
CPT1AP50416 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.68■■□□□ 1.06
CPT1AP50416 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPT1AP50416 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPT1AP50416 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.68■■□□□ 1.06
CPT1AP50416 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.67■■□□□ 1.06
CPT1AP50416 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CPT1AP50416 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPT1AP50416 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms