Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.24■□□□□ 0.99
USP8P40818 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP8P40818 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP8P40818 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP8P40818 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP8P40818 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.24■□□□□ 0.99
USP8P40818 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.24■□□□□ 0.99
USP8P40818 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.24■□□□□ 0.99
USP8P40818 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.24■□□□□ 0.99
USP8P40818 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
USP8P40818 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP8P40818 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP8P40818 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
USP8P40818 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.23■□□□□ 0.99
USP8P40818 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
USP8P40818 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
USP8P40818 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
USP8P40818 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.23■□□□□ 0.99
USP8P40818 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP8P40818 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.23■□□□□ 0.99
USP8P40818 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
USP8P40818 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.23■□□□□ 0.99
USP8P40818 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.23■□□□□ 0.99
USP8P40818 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP8P40818 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP8P40818 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP8P40818 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP8P40818 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP8P40818 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP8P40818 AC090340.1-201ENST00000620778 4980 ntBASIC21.23■□□□□ 0.99
USP8P40818 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
USP8P40818 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP8P40818 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
USP8P40818 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.23■□□□□ 0.99
USP8P40818 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
USP8P40818 AP001271.2-201ENST00000624018 1556 ntBASIC21.23■□□□□ 0.99
USP8P40818 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP8P40818 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP8P40818 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.22■□□□□ 0.99
USP8P40818 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.22■□□□□ 0.99
USP8P40818 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
USP8P40818 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
USP8P40818 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP8P40818 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.22■□□□□ 0.99
USP8P40818 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP8P40818 AL355802.2-201ENST00000402069 882 ntBASIC21.22■□□□□ 0.99
USP8P40818 HLA-L-209ENST00000420110 1011 ntBASIC21.22■□□□□ 0.99
USP8P40818 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.22■□□□□ 0.99
USP8P40818 AC005829.2-201ENST00000571422 1056 ntBASIC21.22■□□□□ 0.99
USP8P40818 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.22■□□□□ 0.99
USP8P40818 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.22■□□□□ 0.99
USP8P40818 MYC-209ENST00000641252 345 ntBASIC21.22■□□□□ 0.99
USP8P40818 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP8P40818 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
USP8P40818 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP8P40818 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP8P40818 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
USP8P40818 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP8P40818 AC092368.3-202ENST00000574180 1591 ntBASIC21.22■□□□□ 0.99
USP8P40818 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP8P40818 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP8P40818 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP8P40818 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.22■□□□□ 0.99
USP8P40818 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP8P40818 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP8P40818 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.21■□□□□ 0.99
USP8P40818 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.21■□□□□ 0.99
USP8P40818 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.21■□□□□ 0.99
USP8P40818 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.21■□□□□ 0.99
USP8P40818 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.21■□□□□ 0.99
USP8P40818 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
USP8P40818 AC133041.1-202ENST00000642053 222 ntBASIC21.21■□□□□ 0.99
USP8P40818 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.21■□□□□ 0.99
USP8P40818 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
USP8P40818 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP8P40818 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.21■□□□□ 0.99
USP8P40818 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
USP8P40818 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP8P40818 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP8P40818 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.2■□□□□ 0.98
USP8P40818 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
USP8P40818 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP8P40818 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
USP8P40818 AC069152.1-201ENST00000438030 544 ntBASIC21.2■□□□□ 0.98
USP8P40818 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms