Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CA15P1-201ENST00000481698 905 ntBASIC22.14■■□□□ 1.13
HOXC6P09630 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HOXC6P09630 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.14■■□□□ 1.13
HOXC6P09630 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.14■■□□□ 1.13
HOXC6P09630 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HOXC6P09630 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HOXC6P09630 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HOXC6P09630 KRT8P8-201ENST00000434750 1448 ntBASIC22.14■■□□□ 1.13
HOXC6P09630 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HOXC6P09630 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.14■■□□□ 1.13
HOXC6P09630 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.14■■□□□ 1.13
HOXC6P09630 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
HOXC6P09630 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
HOXC6P09630 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.13■■□□□ 1.13
HOXC6P09630 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.13■■□□□ 1.13
HOXC6P09630 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.13■■□□□ 1.13
HOXC6P09630 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.13■■□□□ 1.13
HOXC6P09630 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.13■■□□□ 1.13
HOXC6P09630 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.13■■□□□ 1.13
HOXC6P09630 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.13■■□□□ 1.13
HOXC6P09630 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.13■■□□□ 1.13
HOXC6P09630 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.13■■□□□ 1.13
HOXC6P09630 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.13■■□□□ 1.13
HOXC6P09630 FAM86EP-206ENST00000510506 987 ntBASIC22.13■■□□□ 1.13
HOXC6P09630 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC22.13■■□□□ 1.13
HOXC6P09630 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HOXC6P09630 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.13■■□□□ 1.13
HOXC6P09630 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HOXC6P09630 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HOXC6P09630 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.13■■□□□ 1.13
HOXC6P09630 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.13■■□□□ 1.13
HOXC6P09630 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HOXC6P09630 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
HOXC6P09630 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.13■■□□□ 1.13
HOXC6P09630 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HOXC6P09630 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.13■■□□□ 1.13
HOXC6P09630 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
HOXC6P09630 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
HOXC6P09630 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
HOXC6P09630 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.13■■□□□ 1.13
HOXC6P09630 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
HOXC6P09630 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HOXC6P09630 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
HOXC6P09630 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
HOXC6P09630 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.12■■□□□ 1.13
HOXC6P09630 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HOXC6P09630 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
HOXC6P09630 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.12■■□□□ 1.13
HOXC6P09630 HOMER2P1-201ENST00000455653 964 ntBASIC22.12■■□□□ 1.13
HOXC6P09630 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.12■■□□□ 1.13
HOXC6P09630 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC22.12■■□□□ 1.13
HOXC6P09630 TOLLIP-AS1-201ENST00000530897 939 ntBASIC22.12■■□□□ 1.13
HOXC6P09630 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.12■■□□□ 1.13
HOXC6P09630 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.12■■□□□ 1.13
HOXC6P09630 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HOXC6P09630 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC22.12■■□□□ 1.13
HOXC6P09630 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
HOXC6P09630 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HOXC6P09630 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
HOXC6P09630 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HOXC6P09630 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HOXC6P09630 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HOXC6P09630 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HOXC6P09630 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HOXC6P09630 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.11■■□□□ 1.13
HOXC6P09630 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HOXC6P09630 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
HOXC6P09630 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.11■■□□□ 1.13
HOXC6P09630 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.11■■□□□ 1.13
HOXC6P09630 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HOXC6P09630 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC22.11■■□□□ 1.13
HOXC6P09630 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.11■■□□□ 1.13
HOXC6P09630 KRT18P56-201ENST00000507275 550 ntBASIC22.11■■□□□ 1.13
HOXC6P09630 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.11■■□□□ 1.13
HOXC6P09630 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HOXC6P09630 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HOXC6P09630 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
HOXC6P09630 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HOXC6P09630 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
HOXC6P09630 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
HOXC6P09630 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.1■■□□□ 1.13
HOXC6P09630 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HOXC6P09630 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HOXC6P09630 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HOXC6P09630 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HOXC6P09630 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HOXC6P09630 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
HOXC6P09630 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
HOXC6P09630 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
HOXC6P09630 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
HOXC6P09630 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.1■■□□□ 1.13
HOXC6P09630 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.1■■□□□ 1.13
HOXC6P09630 WDR88-203ENST00000592765 651 ntTSL 5 BASIC22.1■■□□□ 1.13
HOXC6P09630 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.1■■□□□ 1.13
HOXC6P09630 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.1■■□□□ 1.13
HOXC6P09630 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HOXC6P09630 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.1■■□□□ 1.13
HOXC6P09630 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.1■■□□□ 1.13
HOXC6P09630 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HOXC6P09630 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms