Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
COL2A1P02458 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
COL2A1P02458 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.92■■□□□ 1.26
COL2A1P02458 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL2A1P02458 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL2A1P02458 ARMC10P1-201ENST00000313754 855 ntBASIC22.92■■□□□ 1.26
COL2A1P02458 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
COL2A1P02458 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
COL2A1P02458 NTF6B-201ENST00000591913 560 ntBASIC22.92■■□□□ 1.26
COL2A1P02458 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL2A1P02458 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL2A1P02458 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL2A1P02458 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL2A1P02458 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL2A1P02458 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
COL2A1P02458 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
COL2A1P02458 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
COL2A1P02458 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.91■■□□□ 1.26
COL2A1P02458 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
COL2A1P02458 AC117947.1-201ENST00000427448 529 ntBASIC22.91■■□□□ 1.26
COL2A1P02458 BX664615.1-201ENST00000443558 458 ntBASIC22.91■■□□□ 1.26
COL2A1P02458 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.91■■□□□ 1.26
COL2A1P02458 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.91■■□□□ 1.26
COL2A1P02458 WDR88-203ENST00000592765 651 ntTSL 5 BASIC22.91■■□□□ 1.26
COL2A1P02458 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
COL2A1P02458 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
COL2A1P02458 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL2A1P02458 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL2A1P02458 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL2A1P02458 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL2A1P02458 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL2A1P02458 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
COL2A1P02458 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
COL2A1P02458 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.9■■□□□ 1.26
COL2A1P02458 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
COL2A1P02458 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL2A1P02458 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC22.9■■□□□ 1.26
COL2A1P02458 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
COL2A1P02458 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.9■■□□□ 1.26
COL2A1P02458 PRSS44-201ENST00000515154 1146 ntBASIC22.9■■□□□ 1.26
COL2A1P02458 AL353719.1-201ENST00000566847 864 ntBASIC22.9■■□□□ 1.26
COL2A1P02458 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.9■■□□□ 1.26
COL2A1P02458 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.9■■□□□ 1.26
COL2A1P02458 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
COL2A1P02458 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
COL2A1P02458 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
COL2A1P02458 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.9■■□□□ 1.26
COL2A1P02458 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.89■■□□□ 1.26
COL2A1P02458 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
COL2A1P02458 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
COL2A1P02458 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC22.89■■□□□ 1.25
COL2A1P02458 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL2A1P02458 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.89■■□□□ 1.25
COL2A1P02458 LINC01465-201ENST00000408887 1940 ntBASIC22.89■■□□□ 1.25
COL2A1P02458 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL2A1P02458 FAM8A6P-201ENST00000407496 1135 ntBASIC22.89■■□□□ 1.25
COL2A1P02458 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
COL2A1P02458 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.89■■□□□ 1.25
COL2A1P02458 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.89■■□□□ 1.25
COL2A1P02458 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.89■■□□□ 1.25
COL2A1P02458 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.89■■□□□ 1.25
COL2A1P02458 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL2A1P02458 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL2A1P02458 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.89■■□□□ 1.25
COL2A1P02458 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
COL2A1P02458 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.89■■□□□ 1.25
COL2A1P02458 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
COL2A1P02458 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL2A1P02458 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL2A1P02458 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
COL2A1P02458 AK4P3-201ENST00000418260 669 ntBASIC22.88■■□□□ 1.25
COL2A1P02458 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL2A1P02458 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC22.88■■□□□ 1.25
COL2A1P02458 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.88■■□□□ 1.25
COL2A1P02458 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
COL2A1P02458 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL2A1P02458 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
COL2A1P02458 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL2A1P02458 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL2A1P02458 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
COL2A1P02458 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL2A1P02458 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL2A1P02458 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL2A1P02458 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL2A1P02458 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.87■■□□□ 1.25
COL2A1P02458 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC22.87■■□□□ 1.25
COL2A1P02458 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22.87■■□□□ 1.25
COL2A1P02458 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
COL2A1P02458 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
COL2A1P02458 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.86■■□□□ 1.25
COL2A1P02458 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.86■■□□□ 1.25
COL2A1P02458 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
COL2A1P02458 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.86■■□□□ 1.25
COL2A1P02458 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.86■■□□□ 1.25
COL2A1P02458 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.86■■□□□ 1.25
COL2A1P02458 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC22.86■■□□□ 1.25
COL2A1P02458 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC22.86■■□□□ 1.25
COL2A1P02458 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
COL2A1P02458 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
COL2A1P02458 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms