Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFS4O43181 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NDUFS4O43181 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFS4O43181 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFS4O43181 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NDUFS4O43181 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFS4O43181 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
NDUFS4O43181 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.74■□□□□ 0.59
NDUFS4O43181 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.74■□□□□ 0.59
NDUFS4O43181 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.74■□□□□ 0.59
NDUFS4O43181 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFS4O43181 YBX1P10-201ENST00000444752 975 ntBASIC18.74■□□□□ 0.59
NDUFS4O43181 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.74■□□□□ 0.59
NDUFS4O43181 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.74■□□□□ 0.59
NDUFS4O43181 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFS4O43181 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFS4O43181 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.74■□□□□ 0.59
NDUFS4O43181 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFS4O43181 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.74■□□□□ 0.59
NDUFS4O43181 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.74■□□□□ 0.59
NDUFS4O43181 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFS4O43181 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFS4O43181 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFS4O43181 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFS4O43181 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.74■□□□□ 0.59
NDUFS4O43181 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NDUFS4O43181 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NDUFS4O43181 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFS4O43181 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFS4O43181 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFS4O43181 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFS4O43181 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFS4O43181 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NDUFS4O43181 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFS4O43181 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NDUFS4O43181 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.73■□□□□ 0.59
NDUFS4O43181 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFS4O43181 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.73■□□□□ 0.59
NDUFS4O43181 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.73■□□□□ 0.59
NDUFS4O43181 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.73■□□□□ 0.59
NDUFS4O43181 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.73■□□□□ 0.59
NDUFS4O43181 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NDUFS4O43181 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.73■□□□□ 0.59
NDUFS4O43181 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NDUFS4O43181 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NDUFS4O43181 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFS4O43181 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.72■□□□□ 0.59
NDUFS4O43181 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFS4O43181 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFS4O43181 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NDUFS4O43181 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFS4O43181 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFS4O43181 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.72■□□□□ 0.59
NDUFS4O43181 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFS4O43181 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.72■□□□□ 0.59
NDUFS4O43181 AC124016.1-201ENST00000609552 612 ntBASIC18.72■□□□□ 0.59
NDUFS4O43181 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFS4O43181 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFS4O43181 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFS4O43181 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFS4O43181 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFS4O43181 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFS4O43181 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NDUFS4O43181 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.71■□□□□ 0.59
NDUFS4O43181 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NDUFS4O43181 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NDUFS4O43181 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NDUFS4O43181 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
NDUFS4O43181 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NDUFS4O43181 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.71■□□□□ 0.59
NDUFS4O43181 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NDUFS4O43181 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NDUFS4O43181 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.71■□□□□ 0.59
NDUFS4O43181 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NDUFS4O43181 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NDUFS4O43181 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.71■□□□□ 0.59
NDUFS4O43181 RPPH1-201ENST00000516869 333 ntBASIC18.71■□□□□ 0.59
NDUFS4O43181 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.71■□□□□ 0.59
NDUFS4O43181 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.71■□□□□ 0.59
NDUFS4O43181 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NDUFS4O43181 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NDUFS4O43181 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.71■□□□□ 0.59
NDUFS4O43181 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.71■□□□□ 0.59
NDUFS4O43181 FAM197Y4-202ENST00000622692 608 ntBASIC18.71■□□□□ 0.59
NDUFS4O43181 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NDUFS4O43181 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.71■□□□□ 0.59
NDUFS4O43181 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.71■□□□□ 0.59
NDUFS4O43181 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.71■□□□□ 0.59
NDUFS4O43181 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NDUFS4O43181 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
NDUFS4O43181 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDUFS4O43181 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NDUFS4O43181 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDUFS4O43181 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.7■□□□□ 0.58
NDUFS4O43181 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDUFS4O43181 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDUFS4O43181 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NDUFS4O43181 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.7■□□□□ 0.58
NDUFS4O43181 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
NDUFS4O43181 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms